Basic Statistics
Measure | Value |
---|---|
Filename | H23NVBCXX l02n01 24h_64.34100000006614.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 93988 |
Sequences flagged as poor quality | 0 |
Sequence length | 51 |
%GC | 49 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
CTTATACACATCTCCGAGCCCACGAGACCAAGGCGAATCTCGTATGCCGTC | 11149 | 11.862152615227476 | No Hit |
TTATACACATCTCCGAGCCCACGAGACCAAGGCGAATCTCGTATGCCGTCT | 144 | 0.15321104821892156 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TGCCGTC | 1290 | 0.0 | 43.255817 | 45 |
ATGCCGT | 1300 | 0.0 | 42.923077 | 44 |
CGTATGC | 1320 | 0.0 | 42.613636 | 41 |
CTCGTAT | 1315 | 0.0 | 42.60456 | 39 |
TATGCCG | 1315 | 0.0 | 42.60456 | 43 |
TCTCGTA | 1315 | 0.0 | 42.60456 | 38 |
TCGTATG | 1315 | 0.0 | 42.60456 | 40 |
AATCTCG | 1280 | 0.0 | 42.539062 | 36 |
GTATGCC | 1320 | 0.0 | 42.44318 | 42 |
GGCGAAT | 1265 | 0.0 | 42.332016 | 32 |
CGAGACC | 1310 | 0.0 | 42.251907 | 23 |
CAAGGCG | 1285 | 0.0 | 42.198444 | 29 |
GCGAATC | 1270 | 0.0 | 42.165356 | 33 |
GAATCTC | 1290 | 0.0 | 42.034885 | 35 |
AGGCGAA | 1275 | 0.0 | 42.0 | 31 |
CGAATCT | 1275 | 0.0 | 42.0 | 34 |
ACGAGAC | 1345 | 0.0 | 41.988846 | 22 |
ATCTCGT | 1335 | 0.0 | 41.966293 | 37 |
GACCAAG | 1300 | 0.0 | 41.884617 | 26 |
AAGGCGA | 1280 | 0.0 | 41.835938 | 30 |