H23NVBCXX l02n01 18h_7.34100000004f2f.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23NVBCXX l02n01 18h_7.34100000004f2f.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	6876
Sequences flagged as poor quality	0
Sequence length	51
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACAATGCGTTATCTCGTATGCCGTC	181	2.632344386271088	No Hit
TCTTATACACATCTCCGAGCCCACGAGACAATGCGTTATCTCGTATGCCGT	18	0.2617801047120419	No Hit
CTTATACACATCTCCGAGCCCACGAGACTGTTATACATCTCGTATGCCGTC	15	0.2181500872600349	RNA PCR Primer, Index 39 (95% over 21bp)
CTTATACACATCTCCGAGCCCACGAGACAGATATAAATCTCGTATGCCGTC	14	0.2036067481093659	No Hit
CTTATACACATCTCCGAGCCCACGAGACTAGATCCTATCTCGTATGCCGTC	12	0.17452006980802792	No Hit
CTTATACACATCTCCGAGCCCACGAGACTAAGCATGATCTCGTATGCCGTC	8	0.11634671320535195	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACAATGCGTTATCTCGTATGCCG	8	0.11634671320535195	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATGCC	45	2.7830538E-10	45.000004	42
CAATGCG	30	1.8657538E-6	45.000004	28
ATCTCGT	45	2.7830538E-10	45.000004	37
CGTTATC	30	1.8657538E-6	45.000004	33
ATCTCCG	45	2.7830538E-10	45.000004	10
TGCCGTC	45	2.7830538E-10	45.000004	45
CCACGAG	45	2.7830538E-10	45.000004	20
TTATCTC	30	1.8657538E-6	45.000004	35
TATGCCG	45	2.7830538E-10	45.000004	43
CACGAGA	45	2.7830538E-10	45.000004	21
CCCACGA	45	2.7830538E-10	45.000004	19
GACAATG	30	1.8657538E-6	45.000004	26
ACGAGAC	45	2.7830538E-10	45.000004	22
ATGCCGT	45	2.7830538E-10	45.000004	44
CGTATGC	45	2.7830538E-10	45.000004	41
GCGTTAT	30	1.8657538E-6	45.000004	32
TCGTATG	45	2.7830538E-10	45.000004	40
TCTCCGA	45	2.7830538E-10	45.000004	11
TCCGAGC	45	2.7830538E-10	45.000004	13
GTTATCT	30	1.8657538E-6	45.000004	34