H23NVBCXX l02n01 18h_32.341000000050d8.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23NVBCXX l02n01 18h_32.341000000050d8.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2520
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACCTCTACTTATCTCGTATGCCGTC	71	2.8174603174603177	No Hit
CTTATACACATCTCCGAGCCCACGAGACAACATAATATCTCGTATGCCGTC	47	1.8650793650793651	No Hit
CTTATACACATCTCCGAGCCCACGAGACTTGCTGGAATCTCGTATGCCGTC	41	1.6269841269841272	No Hit
CTTATACACATCTCCGAGCCCACGAGACCATTCCGAATCTCGTATGCCGTC	18	0.7142857142857143	RNA PCR Primer, Index 46 (95% over 21bp)
CTTATACACATCTCCGAGCCCACGAGACAGATATAAATCTCGTATGCCGTC	18	0.7142857142857143	No Hit
CTTATACACATCTCCGAGCCCACGAGACTCGCTATGATCTCGTATGCCGTC	12	0.4761904761904762	No Hit
CTTATACACATCTCCGAGCCCACGAGACCAAGGCGAATCTCGTATGCCGTC	10	0.3968253968253968	No Hit
CTTATACACATCTCCGAGCCCACGAGACCTATTCAAATCTCGTATGCCGTC	9	0.35714285714285715	RNA PCR Primer, Index 13 (95% over 21bp)
CTTATACACATCTCCGAGCCCACGAGACGTCTTAGTATCTCGTATGCCGTC	6	0.2380952380952381	No Hit
CTTATACACATCTCCGAGCCCACGAGACTGATTACAATCTCGTATGCCGTC	4	0.15873015873015872	No Hit
CTTATACACATCTCCGAGCCCACGAGACTACCGCTGATCTCGTATGCCGTC	4	0.15873015873015872	No Hit
CTTATACACATCTCCGAGCCCACGAGACCTGATTAAATCTCGTATGCCGTC	3	0.11904761904761905	No Hit
CTTCTGGAGTGTCTGAAGACAGCTACAGTGTACTTACACTGTCTCTTATAC	3	0.11904761904761905	No Hit
ACATAGGCTTCATTAAGTTGGACTAAGCGACCTTGAATGGATTCGACTGAC	3	0.11904761904761905	No Hit
CTTATACACATCTCCGAGCCCACGAGAACTCTACTTATCTCGTATGCCGTC	3	0.11904761904761905	No Hit
TTATACACATCTCCGAGCCCACGAGACCTCTACTTATCTCGTATGCCGTCT	3	0.11904761904761905	No Hit
TTATACACATCTCCGAGCCCACGAGACAACATAATATCTCGTATGCCGTCT	3	0.11904761904761905	RNA PCR Primer, Index 44 (95% over 22bp)

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGAGCCC	35	4.106454E-6	38.57143	15
CCGAGCC	35	4.106454E-6	38.57143	14
AGCCCAC	30	8.466285E-5	37.500004	17
GCCCACG	30	8.466285E-5	37.500004	18
TGCCGTC	30	8.466285E-5	37.500004	45
CCACGAG	30	8.466285E-5	37.500004	20
GAGCCCA	30	8.466285E-5	37.500004	16
CACGAGA	30	8.466285E-5	37.500004	21
CCCACGA	30	8.466285E-5	37.500004	19
ACGAGAC	30	8.466285E-5	37.500004	22
TATCTCG	30	8.466285E-5	37.500004	36
ATCTCCG	40	1.0283513E-5	33.75	10
TCTCCGA	40	1.0283513E-5	33.75	11
TCCGAGC	40	1.0283513E-5	33.75	13
CTCCGAG	40	1.0283513E-5	33.75	12
GTATGCC	35	2.0993862E-4	32.14286	42
ATCTCGT	35	2.0993862E-4	32.14286	37
TATGCCG	35	2.0993862E-4	32.14286	43
TCTCGTA	35	2.0993862E-4	32.14286	38
ATGCCGT	35	2.0993862E-4	32.14286	44