H23NVBCXX l02n01 12h_86.341000000073f8.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23NVBCXX l02n01 12h_86.341000000073f8.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	55141
Sequences flagged as poor quality	0
Sequence length	51
%GC	37

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACAACATAATATCTCGTATGCCGTC	2355	4.270869226165648	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	797	1.445385466349903	No Hit
TTATACACATCTCCGAGCCCACGAGACAACATAATATCTCGTATGCCGTCT	452	0.8197167262109863	RNA PCR Primer, Index 44 (95% over 22bp)
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	172	0.31192760377940193	No Hit
AAAAAAAAAAGTACTCTGCGTTGATACCCTGTCTCTTATACACATCTCCGA	123	0.22306450735387462	No Hit
AAAAAGTACTCTGCGTTGATACCTGTCTCTTATACACATCTCCGAGCCCAC	111	0.201302116392521	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	111	0.201302116392521	No Hit
TCTTATACACATCTCCGAGCCCACGAGACAACATAATATCTCGTATGCCGT	107	0.19404798607206977	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	72	0.1305743457681217	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	67	0.12150668286755771	No Hit
AAAAAGTACTCTGCGTTGATACTGTCTCTTATACACATCTCCGAGCCCACG	62	0.11243901996699371	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	45	1.8741048E-8	39.994354	1
CCAGCTC	25	0.0020912308	35.99492	40
GCCGTCT	80	1.8189894E-12	33.745235	45
TGCCGTC	300	0.0	32.995342	45
TAAGTAA	30	0.0051088575	29.995764	16
ATTGGTT	30	0.0051088575	29.995764	3
AACTTAT	30	0.0051088575	29.995764	2
TGTACCC	30	0.0051088575	29.995764	27
GTAGTTA	30	0.0051088575	29.995764	13
ATGCCGT	340	0.0	29.113537	44
ATCTCGT	340	0.0	28.451866	37
TCTCGTA	340	0.0	28.451866	38
TCGTATG	340	0.0	28.451866	40
ACGAGAC	350	0.0	28.281721	22
TATCTCG	335	0.0	28.204975	36
CTCGTAT	345	0.0	28.03952	39
CCACGAG	355	0.0	27.883387	20
TATGCCG	355	0.0	27.883387	43
CACGAGA	355	0.0	27.883387	21
CCCACGA	355	0.0	27.883387	19