H23NVBCXX l02n01 12h_57.34100000007222.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23NVBCXX l02n01 12h_57.34100000007222.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	76625
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACCAAGGCGAATCTCGTATGCCGTC	1699	2.2172920065252852	No Hit
TTATACACATCTCCGAGCCCACGAGACCAAGGCGAATCTCGTATGCCGTCT	339	0.4424143556280587	No Hit
ATACACATCTCCGAGCCCACGAGACCAAGGCGAATCTCGTATGCCGTCTTC	311	0.40587275693311586	RNA PCR Primer, Index 46 (95% over 22bp)
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	258	0.3367047308319739	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	188	0.24535073409461663	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	142	0.18531810766721044	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	113	0.1474714518760196	No Hit
TATACACATCTCCGAGCCCACGAGACCAAGGCGAATCTCGTATGCCGTCTT	93	0.12137030995106035	RNA PCR Primer, Index 46 (95% over 21bp)

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACAGTGT	25	0.0020948802	36.000004	31
CTCTTTA	25	0.0020948802	36.000004	1
GAATATT	25	0.0020948802	36.000004	4
TAAGGCG	25	0.0020948802	36.000004	5
GTATCAA	120	0.0	33.75	1
CGTCTTC	45	3.4489334E-5	30.0	45
GTATAAA	30	0.0051176697	29.999998	1
GGCGCAG	30	0.0051176697	29.999998	13
TGTAAAG	30	0.0051176697	29.999998	2
CCGAGCC	240	0.0	28.124998	14
TATCAAC	145	0.0	27.931034	2
GCGAATC	235	0.0	27.765957	33
GAATCTC	235	0.0	27.765957	35
CGAATCT	235	0.0	27.765957	34
GGCGAAT	235	0.0	27.765957	32
TCTCCGA	245	0.0	27.55102	11
CGAGACC	245	0.0	27.55102	23
ACGAGAC	245	0.0	27.55102	22
ATCAACG	140	0.0	27.32143	3
CGTATGC	240	0.0	27.187498	41