H23NVBCXX l02n01 0h_84.34100000007a87.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23NVBCXX l02n01 0h_84.34100000007a87.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	683768
Sequences flagged as poor quality	0
Sequence length	51
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACTAAGCATGATCTCGTATGCCGTC	5861	0.8571620783657615	No Hit
GTCCTAAAGTGTGTATTTCTCATTTTCCGTGATTTTCAGTTTTCTCGCCAT	1468	0.21469270278808017	No Hit
CTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGAA	1244	0.1819330533163295	No Hit
GTCCTACAGTGGACATTTCTAAATTTTCCACCTTTTTCAGTTTTCCTCGCC	862	0.12606615109218333	No Hit
GAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGAAACATCCACTTGA	737	0.10778509669946532	No Hit
CTTTAGGACGTGAAATATGGCGAGGAAAACTGAAAAAGGTGGAAAATTTAG	705	0.1031051467749295	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CTCGTAT	710	39.294945	39
ATCTCGT	725	38.792286	37
GATCTCG	725	38.792286	36
TCTCGTA	720	38.74918	38
TCGTATG	730	38.526585	40
CGAGACT	735	38.2645	23
CGTATGC	735	37.95838	41
TATGCCG	735	37.95838	43
ATGCCGT	745	37.44887	44
ACGAGAC	750	37.199215	22
ATCTCCG	745	37.146866	10
GAGACTA	765	37.05804	24
CTCCGAG	760	36.712437	12
GCCCACG	760	36.70975	18
TGCCGTC	765	36.46982	45
TCTCCGA	770	35.943424	11
ACTAAGC	785	35.540653	27
CACGAGA	790	35.315712	21
CCCACGA	795	35.093597	19
TCCGAGC	795	34.81313	13