H23NVBCXX l02n01 0h_76.341000000079f2.fastq.gz FastQC Report

Summary

Basic Statistics
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Adapter Content
Kmer Content

Basic Statistics

Measure	Value
Filename	H23NVBCXX l02n01 0h_76.341000000079f2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1690
Sequences flagged as poor quality	0
Sequence length	51
%GC	43

Per base sequence quality

Per base quality graph

Per tile sequence quality

Per base quality graph

Per sequence quality scores

Per Sequence quality graph

Per base sequence content

Per base sequence content

Per sequence GC content

Per sequence GC content graph

Per base N content

N content graph

Sequence Length Distribution

Sequence length distribution

Sequence Duplication Levels

Duplication level graph

Overrepresented sequences

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACTCTGGACCATCTCGTATGCCGTC	15	0.8875739644970414	No Hit
CTTATACACATCTCCGAGCCCACGAGACTGATTACAATCTCGTATGCCGTC	11	0.650887573964497	No Hit
CTTATACACATCTCCGAGCCCACGAGACTCAACTGTATCTCGTATGCCGTC	8	0.4733727810650888	No Hit
CTTATACACATCTCCGAGCCCACGAGACTGTTATACATCTCGTATGCCGTC	8	0.4733727810650888	RNA PCR Primer, Index 39 (95% over 21bp)
CTTATACACATCTCCGAGCCCACGAGACTCGACGGCATCTCGTATGCCGTC	6	0.35502958579881655	No Hit
CTTATACACATCTCCGAGCCCACGAGACTAAGCATGATCTCGTATGCCGTC	6	0.35502958579881655	No Hit
CTTATACACATCTCCGAGCCCACGAGACAGGATGTGATCTCGTATGCCGTC	5	0.2958579881656805	No Hit
CTTATACACATCTCCGAGCCCACGAGACGTTCATTAATCTCGTATGCCGTC	4	0.2366863905325444	RNA PCR Primer, Index 45 (95% over 21bp)
CTTATACACATCTCCGAGCCCACGAGACGTCTTAGTATCTCGTATGCCGTC	3	0.17751479289940827	No Hit
TCTTTCCCTTGCGGTACTAGTTCTATAGCTCCTAGATGTACGAATTTCTTT	2	0.1183431952662722	No Hit
CTATAGCTCCTAGATGTACGAATTTCTTTCTCCAATACCTGTCTCTTATAC	2	0.1183431952662722	No Hit
AGCTATCACCAAGCTCGTTAGGCTTTTCACCTCTACCTAAAAATCTTCTCA	2	0.1183431952662722	No Hit
CGTCTATGTGGCAAAATAGTGAGAAGATTTTTAGGTAGAGGTGAAAAGCCT	2	0.1183431952662722	No Hit
CTTTATACACATCTCCGAGCCCACGAGACTCGACGGCATCTCGTATGCCGT	2	0.1183431952662722	RNA PCR Primer, Index 41 (95% over 21bp)
GGTACAAGGTTTAATCTTTGCTTGTTCTTACTTTTAATTAGTCTTTCATCC	2	0.1183431952662722	No Hit
ACTTAGCAGAGTTGATTTCCCCACAGATGGAAAACCTGTCTCTTATACACA	2	0.1183431952662722	No Hit
CTTATACACATCTCCGAGCCCACGAGACTAGATCCTATCTCGTATGCCGTC	2	0.1183431952662722	No Hit
ATGTATGTGACATATTTCTTTACCAATTTTTACAGCGGGAGTACCACCTGT	2	0.1183431952662722	No Hit
GAAGACATTGATGCTAGTGTCCCGTACTCTGCGTTGATACCTGTCTCTTAT	2	0.1183431952662722	No Hit

Adapter Content

Adapter graph

Kmer Content

No overrepresented Kmers