Basic Statistics
Measure | Value |
---|---|
Filename | H23NVBCXX l02n01 0h_66.34100000007945.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 585395 |
Sequences flagged as poor quality | 0 |
Sequence length | 51 |
%GC | 44 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
CTTATACACATCTCCGAGCCCACGAGACTCGCTATGATCTCGTATGCCGTC | 6317 | 1.0791004364574348 | No Hit |
TTATACACATCTCCGAGCCCACGAGACTCGCTATGATCTCGTATGCCGTCT | 736 | 0.12572707317281495 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CGCTATG | 735 | 0.0 | 39.185905 | 30 |
ACTCGCT | 750 | 0.0 | 38.7022 | 27 |
CGTATGC | 755 | 0.0 | 38.44261 | 41 |
CTCGCTA | 765 | 0.0 | 38.237473 | 28 |
GACTCGC | 765 | 0.0 | 37.94334 | 26 |
TGCCGTC | 750 | 0.0 | 37.798923 | 45 |
AGACTCG | 770 | 0.0 | 37.69695 | 25 |
TCGCTAT | 770 | 0.0 | 37.69695 | 29 |
ACGAGAC | 770 | 0.0 | 37.69373 | 22 |
TATGCCG | 765 | 0.0 | 37.645985 | 43 |
CCCACGA | 785 | 0.0 | 37.260086 | 19 |
TCGTATG | 785 | 0.0 | 37.260086 | 40 |
CACGAGA | 780 | 0.0 | 37.21048 | 21 |
TCTCGTA | 780 | 0.0 | 37.21048 | 38 |
ATGCCGT | 770 | 0.0 | 37.10933 | 44 |
GCCCACG | 795 | 0.0 | 37.074417 | 18 |
CTCGTAT | 785 | 0.0 | 36.97347 | 39 |
CGAGACT | 795 | 0.0 | 36.791405 | 23 |
CCGAGCC | 800 | 0.0 | 36.56146 | 14 |
CCACGAG | 800 | 0.0 | 36.56146 | 20 |