Basic Statistics
Measure | Value |
---|---|
Filename | H23NVBCXX l02n01 0h_35.34100000007710.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 189874 |
Sequences flagged as poor quality | 0 |
Sequence length | 51 |
%GC | 42 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
CTTATACACATCTCCGAGCCCACGAGACAGGATGTGATCTCGTATGCCGTC | 739 | 0.38920547310321585 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TATGCCG | 95 | 0.0 | 44.997368 | 43 |
CGAGACA | 95 | 0.0 | 44.997368 | 23 |
ATGCCGT | 95 | 0.0 | 44.997368 | 44 |
ACGAGAC | 90 | 0.0 | 44.997368 | 22 |
CGTATGC | 100 | 0.0 | 42.747498 | 41 |
CTCGTAT | 100 | 0.0 | 42.747498 | 39 |
TCTCGTA | 100 | 0.0 | 42.747498 | 38 |
TCGTATG | 100 | 0.0 | 42.747498 | 40 |
CCGAGCC | 105 | 0.0 | 40.711903 | 14 |
CGAGCCC | 105 | 0.0 | 40.711903 | 15 |
GCCCACG | 100 | 0.0 | 40.497627 | 18 |
CCCACGA | 100 | 0.0 | 40.497627 | 19 |
ATCTCGT | 110 | 0.0 | 38.861366 | 37 |
TGCCGTC | 110 | 0.0 | 38.861366 | 45 |
CCACGAG | 105 | 0.0 | 38.56917 | 20 |
TCCGAGC | 115 | 0.0 | 37.171734 | 13 |
CACGAGA | 110 | 0.0 | 36.81603 | 21 |
CTCCGAG | 125 | 0.0 | 34.197998 | 12 |
GTATGCC | 125 | 0.0 | 34.197998 | 42 |
AGCCCAC | 120 | 0.0 | 33.748024 | 17 |