Basic Statistics
Measure | Value |
---|---|
Filename | H23NVBCXX l02n01 0h_26.3410000000767e.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 669083 |
Sequences flagged as poor quality | 0 |
Sequence length | 51 |
%GC | 45 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
CTTATACACATCTCCGAGCCCACGAGACCATCAGACATCTCGTATGCCGTC | 5575 | 0.8332299580171667 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
ACGAGAC | 735 | 0.0 | 38.57066 | 22 |
CGTATGC | 735 | 0.0 | 38.264545 | 41 |
TGCCGTC | 730 | 0.0 | 38.21842 | 45 |
TATGCCG | 740 | 0.0 | 38.005997 | 43 |
ATGCCGT | 740 | 0.0 | 38.005997 | 44 |
TCGTATG | 755 | 0.0 | 37.54892 | 40 |
CTCGTAT | 760 | 0.0 | 37.00584 | 39 |
TCTCGTA | 760 | 0.0 | 37.00584 | 38 |
ATCTCCG | 765 | 0.0 | 36.76672 | 10 |
CGAGACC | 770 | 0.0 | 36.525246 | 23 |
TCTCCGA | 785 | 0.0 | 36.40327 | 11 |
GTATGCC | 775 | 0.0 | 36.2896 | 42 |
CGAGCCC | 790 | 0.0 | 35.885357 | 15 |
CATCTCG | 785 | 0.0 | 35.540695 | 36 |
CCGAGCC | 805 | 0.0 | 35.496185 | 14 |
CACGAGA | 795 | 0.0 | 35.37665 | 21 |
TCCGAGC | 805 | 0.0 | 35.21669 | 13 |
CTCCGAG | 815 | 0.0 | 35.060654 | 12 |
ATCTCGT | 805 | 0.0 | 34.93719 | 37 |
CCACGAG | 825 | 0.0 | 34.635674 | 20 |