H23NVBCXX l02n01 0h_22.3410000000762e.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23NVBCXX l02n01 0h_22.3410000000762e.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	28437
Sequences flagged as poor quality	0
Sequence length	51
%GC	41

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACGAGAGTTGATCTCGTATGCCGTC	643	2.261138657382987	RNA PCR Primer, Index 23 (95% over 21bp)
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	186	0.6540774343285156	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	149	0.523965256531983	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	70	0.24615817420965644	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	58	0.20395963005942963	No Hit
TTATACACATCTCCGAGCCCACGAGACGAGAGTTGATCTCGTATGCCGTCT	34	0.11956254175897597	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGCCGTC	80	0.0	42.1875	45
TATGCCG	80	0.0	42.1875	43
ATCTCGT	75	0.0	42.0	37
CGAGACG	75	0.0	42.0	23
CTCGTAT	75	0.0	42.0	39
AGACGAG	60	3.6379788E-12	41.249996	25
TTGATCT	60	3.6379788E-12	41.249996	34
GACGAGA	60	3.6379788E-12	41.249996	26
CGAGAGT	60	3.6379788E-12	41.249996	28
GAGACGA	60	3.6379788E-12	41.249996	24
GTATGCC	85	0.0	39.705883	42
ATCTCCG	85	0.0	39.705883	10
GCCCACG	85	0.0	39.705883	18
CCACGAG	85	0.0	39.705883	20
CATCTCC	85	0.0	39.705883	9
CACGAGA	85	0.0	39.705883	21
CCCACGA	85	0.0	39.705883	19
ACGAGAC	85	0.0	39.705883	22
ATGCCGT	85	0.0	39.705883	44
CGTATGC	85	0.0	39.705883	41