H23NVBCXX l02n01 0h_17.341000000075cf.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23NVBCXX l02n01 0h_17.341000000075cf.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	110864
Sequences flagged as poor quality	0
Sequence length	51
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	1299	1.1717058738634722	No Hit
CTTATACACATCTCCGAGCCCACGAGACGAGAGTTGATCTCGTATGCCGTC	713	0.6431303218357627	RNA PCR Primer, Index 23 (95% over 21bp)
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	637	0.574577861163227	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	376	0.33915427911675566	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	259	0.23361956992350988	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	168	0.15153701832876315	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CTCGTAT	90	44.99865	39
TATGCCG	90	44.99865	43
GAGACGA	90	44.99865	24
TCTCGTA	90	44.99865	38
GACGAGA	90	44.99865	26
ACGAGAC	90	44.99865	22
TGCCGTC	95	42.649532	45
GCCCACG	95	42.630295	18
CCCACGA	95	42.630295	19
AGACGAG	95	42.630295	25
TCGTATG	95	42.630295	40
CGAGACG	95	42.630295	23
CGTATGC	100	40.49878	41
GATCTCG	95	40.261948	36
ATCTCGT	105	38.570267	37
TCCGAGC	105	38.570267	13
ACGAGAG	105	38.570267	27
CCACGAG	105	38.570267	20
GTTGATC	100	38.248848	33
AGCCCAC	110	36.817074	17