H23NVBCXX l01n01 sv76.341000000046c8.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23NVBCXX l01n01 sv76.341000000046c8.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	40002020
Sequences flagged as poor quality	0
Sequence length	51
%GC	40

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCC	444094	1.1101789359637337	TruSeq Adapter, Index 2 (100% over 51bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GATCGGA	50125	43.665695	1
ATCGGAA	50560	43.397835	2
ACCGATG	49470	42.89916	32
CACCGAT	49480	42.867428	31
CGATGTA	49570	42.83819	34
CTCGTAT	49490	42.804478	42
TCTCGTA	49520	42.75968	41
ACACGTC	50845	42.63273	13
TCGTATG	49970	42.60134	43
CGTCTGA	50795	42.59928	16
CCGATGT	49865	42.571064	33
CGTATGC	49805	42.55735	44
GTCACCG	50085	42.44845	29
TATCTCG	49915	42.41176	39
ACGTCTG	51100	42.39786	15
TCGGAAG	51945	42.188435	3
CGGAAGA	52100	41.940903	4
TCACCGA	50700	41.875847	30
ATCTCGT	51075	41.488056	40
CACGTCT	52490	41.283783	14