H23LNBCXX_l02n01_bir_1228_pcontrolb_50.3510000004317b.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23LNBCXX_l02n01_bir_1228_pcontrolb_50.3510000004317b.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	19604
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACGATAACCTATCTCGTATGCCGTC	6040	30.810038767598446	No Hit
TCTTATACACATCTCCGAGCCCACGAGACGATAACCTATCTCGTATGCCGT	3614	18.43501326259947	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACGATAACCTATCTCGTATGCCG	742	3.784941848602326	No Hit
AAAAAGTACTCTGCGTTGATACCTGTCTCTTATACACATCTCCGAGCCCAC	52	0.2652519893899204	No Hit
GTATCAACGCAGAGTACTTTTTCTGTCTCTTATACACATCTCCGAGCCCAC	48	0.2448479902060804	No Hit
TTATACACATCTCCGAGCCCACGAGACGATAACCTATCTCGTATGCCGTCT	34	0.1734339930626403	No Hit
GTCTCTTATACACATCTCCGAGCCCACGAGACGATAACCTATCTCGTATGC	22	0.11222199551112018	No Hit
AATGTTCACTGTCTCTTATACACATCTCCGAGCCCACGAGACGATAACCTA	21	0.10712099571516018	No Hit
AAAGTACTCTGCGTTGATACCTGTCTCTTATACACATCTCCGAGCCCACGA	21	0.10712099571516018	No Hit
AAAAAGTACTCTGCGTTGATACCCTGTCTCTTATACACATCTCCGAGCCCA	20	0.10201999591920018	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGCCGTC	675	42.666668	45
ATGCCGT	990	29.090908	44
CGAGACG	1050	27.42857	23
TATGCCG	1055	27.29858	43
GTATGCC	1060	27.169811	42
TCTCGTA	1060	27.169811	38
CGTATGC	1060	27.169811	41
TCGTATG	1060	27.169811	40
CTCGTAT	1060	27.169811	39
AACCTAT	1045	27.129187	32
TAACCTA	1045	27.129187	31
ACCTATC	1045	27.129187	33
CCACGAG	1070	27.126167	20
CACGAGA	1070	27.126167	21
ACGAGAC	1070	27.126167	22
ATCTCGT	1055	27.08531	37
AGACGAT	1055	27.08531	25
GAGACGA	1055	27.08531	24
CCCACGA	1075	27.0	19
CGATAAC	1050	26.999998	28