H23LNBCXX_l02n01_bir_1228_pb_96.35100000042b24.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23LNBCXX_l02n01_bir_1228_pb_96.35100000042b24.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	5189
Sequences flagged as poor quality	0
Sequence length	51
%GC	55

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACCAGCAGCAATCTCGTATGCCGTC	780	15.031798034303334	No Hit
TCTTATACACATCTCCGAGCCCACGAGACCAGCAGCAATCTCGTATGCCGT	74	1.4260936596646754	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACCAGCAGCAATCTCGTATGCCG	21	0.40470225476970517	No Hit
ATACACATCTCCGAGCCCACGAGACCAGCAGCAATCTCGTATGCCGTCTTC	17	0.32761611100404703	TruSeq Adapter, Index 4 (95% over 22bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AGCCCAC	100	45.000004	17
AATCTCG	100	45.000004	36
CAGCAGC	100	45.000004	29
GCCCACG	100	45.000004	18
CAGCAAT	100	45.000004	32
CCACGAG	100	45.000004	20
CACGAGA	100	45.000004	21
CCCACGA	100	45.000004	19
AGCAGCA	100	45.000004	30
ACGAGAC	100	45.000004	22
CGAGCCC	100	45.000004	15
CCGAGCC	100	45.000004	14
TCTCCGA	100	45.000004	11
CGAGACC	100	45.000004	23
AGACCAG	100	45.000004	25
TCCGAGC	100	45.000004	13
GACCAGC	100	45.000004	26
CTCCGAG	100	45.000004	12
GAGACCA	100	45.000004	24
ACCAGCA	100	45.000004	27