H23LNBCXX_l02n01_bir_1228_pb_79.35100000042919.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23LNBCXX_l02n01_bir_1228_pb_79.35100000042919.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	233253
Sequences flagged as poor quality	0
Sequence length	51
%GC	37

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACTGATTACAATCTCGTATGCCGTC	5004	2.1453100281668402	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACTGATTACAATCTCGTATGCCG	2548	1.092376089482236	No Hit
TCTTATACACATCTCCGAGCCCACGAGACTGATTACAATCTCGTATGCCGT	1094	0.4690186192674906	No Hit
GTCTCTTATACACATCTCCGAGCCCACGAGACTGATTACAATCTCGTATGC	575	0.24651344248519846	No Hit
ATATAAGATCATCTCTTACTTTACAAACAACAATGGCTGTCTCTTATACAC	300	0.12861570912271225	No Hit
GAACATCTTTATTTCTGCCTTCATTTCATTATGTACCCAGTAGTCACTGTC	274	0.11746901433207718	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTAGGAC	20	7.008864E-4	45.01673	3
AGGGGTA	20	7.023692E-4	44.99743	23
TGCCGTC	505	0.0	42.769833	45
CGTGAAA	25	0.0021042647	35.997944	31
ATGCCGT	635	0.0	34.0138	44
ACCCTTA	30	0.005134998	30.004717	6
ACATGGC	30	0.0051403856	29.998285	27
CTCTGTG	30	0.0051403856	29.998285	43
CCTTAAT	50	7.105951E-5	27.015831	1
AGTGACC	50	7.137153E-5	26.998457	8
GTGATGC	45	0.0012240326	24.998571	9
GGTTGTC	65	1.517668E-5	24.229383	7
TATGCCG	915	0.0	23.605207	43
GTATGCC	930	0.0	23.4664	42
TAACCCT	60	2.453156E-4	22.508364	4
AGACCTT	50	0.0022571785	22.503538	6
TTATCGA	60	2.4602903E-4	22.498714	29
GATGACT	50	0.0022599935	22.498714	34
TATCGAT	50	0.0022599935	22.498714	30
CCGTTGT	50	0.0022599935	22.498714	33