H23LNBCXX_l02n01_bir_1228_pb_78.351000000428fe.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23LNBCXX_l02n01_bir_1228_pb_78.351000000428fe.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	321745
Sequences flagged as poor quality	0
Sequence length	51
%GC	35

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACTGATTACAATCTCGTATGCCGTC	8379	2.6042362740679734	No Hit
TCTTATACACATCTCCGAGCCCACGAGACTGATTACAATCTCGTATGCCGT	1307	0.40622231891715493	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACTGATTACAATCTCGTATGCCG	616	0.1914559666816889	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	498	0.15478096007707967	No Hit
GTATCAACGCAGAGTACGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAA	426	0.1324029899454537	No Hit
GAGTACGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	388	0.12059239459820666	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	363	0.11282226608028097	No Hit
TATCAACGCAGAGTACGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAA	353	0.10971421467311071	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGCCGTC	965	0.0	43.364876	45
ATGCCGT	1055	0.0	39.665504	44
TATGCCG	1085	0.0	38.568768	43
GTATGCC	1085	0.0	38.568768	42
TCTCGTA	1120	0.0	37.966125	38
ATCTCGT	1130	0.0	37.630142	37
CTCGTAT	1135	0.0	37.464375	39
CGTATGC	1130	0.0	37.43104	41
TCGTATG	1170	0.0	36.151352	40
CAATCTC	1160	0.0	36.075096	35
GTGGCCT	25	0.0021055723	35.997513	9
AATCTCG	1175	0.0	35.61456	36
TACAATC	1230	0.0	33.65621	33
GACTGAT	1240	0.0	33.56623	26
CCACGAG	1270	0.0	33.304787	20
CACGAGA	1275	0.0	33.174175	21
CGAGACT	1270	0.0	33.127636	23
AGACTGA	1275	0.0	32.99772	25
GAGACTG	1270	0.0	32.95048	24
ACAATCT	1275	0.0	32.82126	34