H23LNBCXX_l02n01_bir_1228_pb_77.351000000428d4.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23LNBCXX_l02n01_bir_1228_pb_77.351000000428d4.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	301764
Sequences flagged as poor quality	0
Sequence length	51
%GC	40

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACTGATTACAATCTCGTATGCCGTC	22368	7.412414999801169	No Hit
TCTTATACACATCTCCGAGCCCACGAGACTGATTACAATCTCGTATGCCGT	10611	3.5163240147930175	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACTGATTACAATCTCGTATGCCG	2162	0.7164539176309964	No Hit
ATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACA	341	0.1130022136504023	No Hit
GTCTCTTATACACATCTCCGAGCCCACGAGACTGATTACAATCTCGTATGC	325	0.10770005699818402	No Hit
AAAAAGTACTCTGCGTTGATACCTGTCTCTTATACACATCTCCGAGCCCAC	303	0.10040959160138385	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGCCGTC	2050	0.0	44.779495	45
CCGTCTT	35	6.2339313E-6	38.570576	27
CACGGTT	30	1.1380758E-4	37.499172	23
GTGGACG	25	0.0021048803	35.999207	25
CGGATTA	25	0.0021048803	35.999207	44
CCCGTCT	40	1.5570053E-5	33.749256	26
GACCGGG	35	2.8158474E-4	32.142147	40
TGACCGG	35	2.8158474E-4	32.142147	39
GGTGGCG	35	2.8158474E-4	32.142147	45
ATGCCGT	2995	0.0	30.65041	44
AGTAGAG	30	0.005137705	30.004307	3
TTGTCGG	30	0.0051418706	29.999338	40
GTATCAG	30	0.0051418706	29.999338	15
ATGCGTC	30	0.0051418706	29.999338	7
CGATGCG	30	0.0051418706	29.999338	14
TGTCGGA	30	0.0051418706	29.999338	41
CTCAGGT	30	0.0051418706	29.999338	21
ATCTGCC	30	0.0051418706	29.999338	7
GTCGGAT	30	0.0051418706	29.999338	42
CGACGAT	45	3.482933E-5	29.999336	23