H23LNBCXX_l02n01_bir_1228_pb_76.351000000428ba.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23LNBCXX_l02n01_bir_1228_pb_76.351000000428ba.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	231473
Sequences flagged as poor quality	0
Sequence length	51
%GC	36

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACTGATTACAATCTCGTATGCCGTC	4415	1.9073498852997977	No Hit
TCTTATACACATCTCCGAGCCCACGAGACTGATTACAATCTCGTATGCCGT	597	0.25791344994880616	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	391	0.1689181891624509	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACTGATTACAATCTCGTATGCCG	387	0.16719012584621099	No Hit
GTATCAACGCAGAGTACGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAA	341	0.14731739770945207	No Hit
TATCAACGCAGAGTACGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAA	279	0.12053241630773351	No Hit
GTACGGGCAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	259	0.11189209972653398	No Hit
GAGTACGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	238	0.10281976731627447	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	237	0.1023877514872145	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGCCGTC	445	0.0	43.983486	45
ATGCCGT	500	0.0	39.145298	44
TATAGCC	30	1.1321323E-4	37.527927	2
TATGCCG	545	0.0	36.325912	43
GGCTTAT	25	0.0020915186	36.042397	1
GTATGCC	555	0.0	35.6714	42
CTCGTAT	555	0.0	35.26604	39
ATCTCGT	575	0.0	34.039394	37
TATGCTA	40	1.547297E-5	33.775135	5
TCTCGTA	590	0.0	33.555294	38
CGTATGC	590	0.0	33.17398	41
AATCTCG	595	0.0	32.89521	36
CAATCTC	610	0.0	32.455116	35
TCGTATG	605	0.0	32.35149	40
CGAGACT	625	0.0	31.676197	23
GACTGAT	635	0.0	31.177359	26
ACGAGAC	635	0.0	31.177359	22
ACAATCT	640	0.0	30.933788	34
CACGAGA	645	0.0	30.693989	21
CCACGAG	645	0.0	30.693989	20