H23LNBCXX_l02n01_bir_1228_pb_71.3510000004280d.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23LNBCXX_l02n01_bir_1228_pb_71.3510000004280d.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	180440
Sequences flagged as poor quality	0
Sequence length	51
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACTCAACTGTATCTCGTATGCCGTC	44593	24.71347816448681	No Hit
TCTTATACACATCTCCGAGCCCACGAGACTCAACTGTATCTCGTATGCCGT	8173	4.529483484814897	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACTCAACTGTATCTCGTATGCCG	3423	1.8970294834848147	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGCCGTC	4745	44.5239	45
ATGCCGT	5505	38.37709	44
CGTATGC	5900	35.92218	41
ATCTCGT	5895	35.914482	37
CTCGTAT	5890	35.90677	39
TATGCCG	5890	35.90677	43
GTATGCC	5890	35.90677	42
TCGTATG	5910	35.82333	40
CTGTATC	5915	35.79305	33
TATCTCG	5910	35.78526	36
TCTCGTA	5910	35.78526	38
AGACTCA	5905	35.77746	25
GACTCAA	5910	35.74719	26
ACGAGAC	5950	35.733753	22
GAGACTC	5925	35.732635	24
CACGAGA	5950	35.69594	21
CGAGACT	5940	35.68028	23
CCACGAG	5960	35.673798	20
GTATCTC	5930	35.664566	35
ACTGTAT	5950	35.658127	32