H23LNBCXX_l02n01_bir_1228_pb_66.3510000004276b.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23LNBCXX_l02n01_bir_1228_pb_66.3510000004276b.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	241042
Sequences flagged as poor quality	0
Sequence length	51
%GC	37

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACTCAACTGTATCTCGTATGCCGTC	10055	4.171472191568274	No Hit
TCTTATACACATCTCCGAGCCCACGAGACTCAACTGTATCTCGTATGCCGT	1709	0.7090050696559106	No Hit
GTACGGGAAGCAGTGGTATCAACGCAGAGTACGGGAAGCAGTGGTATCAAC	1230	0.5102845147318725	No Hit
TTCCCGTACTCTGCGTTGATACCACTGCTTCCCGTACTCTGCGTTGATACC	589	0.24435575542851454	No Hit
GAGTACGGGAAGCAGTGGTATCAACGCAGAGTACGGGAAGCAGTGGTATCA	572	0.23730304262327725	No Hit
GTACGGAAGCAGTGGTATCAACGCAGAGTACGGAAGCAGTGGTATCAACGC	563	0.23356925349109284	No Hit
GTATCAACGCAGAGTACGGGAAGCAGTGGTATCAACGCAGAGTACGGGAAG	508	0.2107516532388546	No Hit
CCCGTACTCTGCGTTGATACCACTGCTTCCCGTACTCTGCGTTGATACCAC	484	0.20079488221969613	No Hit
GCGTTGATACCACTGCTTCCCGTACTCTGCGTTGATACCACTGCTTCCCGT	470	0.1949867657918537	No Hit
GATATATACAACTAGACATTTGTTGGGTTTTATTTAACTGTGTTGCTTTTG	457	0.18959351482314285	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACTCAACTGTATCTCGTATGCCG	417	0.17299889645787872	No Hit
TGCTATAGCAGTGTTATTGAACAAAAGCAACACAGTTAAATAAAACCCAAC	311	0.12902315778992873	No Hit
TATCAACGCAGAGTACGGGAAGCAGTGGTATCAACGCAGAGTACGGGAAGC	296	0.12280017590295467	No Hit
GCTTCCGTACTCTGCGTTGATACCACTGCTTCCGTACTCTGCGTTGATACC	292	0.12114071406642826	No Hit
GCTTCCCGTACTCTGCGTTGATACCACTGCTTCCCGTACTCTGCGTTGATA	291	0.12072584860729665	No Hit
CTTCCGTACTCTGCGTTGATACCACTGCTTCCGTACTCTGCGTTGATACCA	288	0.11948125222990184	No Hit
GAGTACGGAAGCAGTGGTATCAACGCAGAGTACGGAAGCAGTGGTATCAAC	272	0.11284340488379618	No Hit
GGTATCAACGCAGAGTACGGGAAGCAGTGGTATCAACGCAGAGTACGGGAA	255	0.10579069207855893	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGCCGTC	1085	0.0	43.340015	45
ATAGGAC	30	1.136012E-4	37.50692	3
ATGCCGT	1265	0.0	37.173058	44
CTCGCAT	25	0.002104051	35.99917	39
CACGAGA	1335	0.0	35.89805	21
CCACGAG	1340	0.0	35.764103	20
TATGCCG	1325	0.0	35.659554	43
ACGAGAC	1350	0.0	35.499184	22
CTCGTAT	1330	0.0	35.356327	39
CGAGACT	1350	0.0	35.33252	23
TATCTCG	1345	0.0	35.29658	36
CGTATGC	1340	0.0	35.26038	41
CCCACGA	1360	0.0	35.23816	19
CTCAACT	1350	0.0	35.165855	28
GTATGCC	1345	0.0	35.1293	42
ATCTCGT	1355	0.0	35.036095	37
ACTCAAC	1365	0.0	34.944252	27
GACTCAA	1365	0.0	34.944252	26
GAGACTC	1370	0.0	34.816715	24
TCTCGTA	1365	0.0	34.77942	38