H23LNBCXX_l02n01_bir_1228_pb_22.351000000421f5.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23LNBCXX_l02n01_bir_1228_pb_22.351000000421f5.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	160876
Sequences flagged as poor quality	0
Sequence length	51
%GC	40

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACAGTGTCTTATCTCGTATGCCGTC	3003	1.8666550635271888	No Hit
TCTTATACACATCTCCGAGCCCACGAGACAGTGTCTTATCTCGTATGCCGT	2674	1.6621497302270072	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACAGTGTCTTATCTCGTATGCCG	542	0.33690544270121087	No Hit
ATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACA	252	0.1566423829533305	No Hit
ATAAGACACTGTCTCTTATACACATCTCCGAGCCCACGAGACAGTGTCTTA	213	0.13240010940102936	No Hit
ATACGAGATAAGACACTGTCTCTTATACACATCTCCGAGCCCACGAGACAG	168	0.10442825530222034	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AACCGGG	45	3.8016879E-10	44.99596	33
CCGGGGG	45	3.8016879E-10	44.99596	35
GAACCGG	45	3.8016879E-10	44.99596	32
TGCCGTC	295	0.0	43.470673	45
GGGGAAC	50	1.0695658E-9	40.496365	38
ACCGGGG	50	1.0695658E-9	40.496365	34
CGGGGGA	55	2.7212081E-9	36.814873	36
TACCGTG	25	0.0020962518	36.01916	5
ACCGTGA	25	0.0020994558	36.00796	6
CGAACCG	50	4.83833E-8	35.99677	31
CGTGAGG	25	0.0021026635	35.99677	8
GGGGGAA	60	6.364644E-9	33.74697	37
TAAGACT	50	1.9594827E-6	31.516766	4
GTCGTAA	30	0.005105343	30.034653	1
CCGTGAG	30	0.005136514	29.997307	7
AGGCGAA	60	2.3990287E-7	29.997307	28
TAGGTTA	80	3.3523975E-9	28.122475	18
GAACTGA	65	4.8334186E-7	27.689821	41
ATGAGGC	65	4.8334186E-7	27.689821	25
GGGAACT	65	4.8334186E-7	27.689821	39