H23LNBCXX_l02n01_bir_1228_pa_92.35100000041eb7.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23LNBCXX_l02n01_bir_1228_pa_92.35100000041eb7.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	11453
Sequences flagged as poor quality	0
Sequence length	51
%GC	52

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACCAGCAGCAATCTCGTATGCCGTC	3220	28.114904391862396	No Hit
TCTTATACACATCTCCGAGCCCACGAGACCAGCAGCAATCTCGTATGCCGT	331	2.8900724700951717	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACCAGCAGCAATCTCGTATGCCG	89	0.7770889723216624	No Hit
CTTATACACATCTCCGAGCCCACGAGACCATCAGCATCTCGTATGCCGTCT	17	0.1484327250502052	RNA PCR Primer, Index 18 (95% over 21bp)
ATACACATCTCCGAGCCCACGAGACCAGCAGCAATCTCGTATGCCGTCTTC	14	0.1222387147472278	TruSeq Adapter, Index 4 (95% over 22bp)
CTTATAACACATCTCCGAGCCCACGAGACCAGCAGCAATCTCGTATGCCGT	14	0.1222387147472278	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGCCGTC	385	43.831165	45
ATGCCGT	415	40.66265	44
AGCCCAC	440	38.86364	17
ATCTCGT	440	38.86364	37
GAGCCCA	440	38.86364	16
TCTCGTA	440	38.86364	38
CCGAGCC	440	38.86364	14
CTCGTAT	440	38.86364	39
GCCCACG	435	38.793106	18
TATGCCG	435	38.793106	43
CACGAGA	435	38.793106	21
CCCACGA	435	38.793106	19
ACGAGAC	435	38.793106	22
CGAGACC	435	38.793106	23
AGACCAG	435	38.793106	25
GACCAGC	435	38.793106	26
AATCTCG	430	38.720932	36
CCAGCAG	430	38.720932	28
CAATCTC	430	38.720932	35
GCAATCT	430	38.720932	34