H23LNBCXX_l02n01_bir_1228_pa_30.351000000416e6.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23LNBCXX_l02n01_bir_1228_pa_30.351000000416e6.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	416198
Sequences flagged as poor quality	0
Sequence length	51
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACCTATTCAAATCTCGTATGCCGTC	20534	4.933709436374033	RNA PCR Primer, Index 13 (95% over 21bp)
TCTTATACACATCTCCGAGCCCACGAGACCTATTCAAATCTCGTATGCCGT	8149	1.9579623160130515	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACCTATTCAAATCTCGTATGCCG	3362	0.8077886006179751	No Hit
ATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACA	889	0.2136002575697144	No Hit
TCATTAACCTATGGATTCAGTTAATGATAGTGTGTCGAAACACACTGGGTT	540	0.1297459382313226	No Hit
GTTAATGATAGTGTGTCGAAACACACTGGGTTTCCCCATTCGGAAATCGCC	475	0.11412837159236709	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGCCGTC	2200	44.281963	45
ATGCCGT	2980	32.691383	44
TATGCCG	3235	30.114473	43
GTATGCC	3260	29.952549	42
CGTATGC	3280	29.701317	41
TCGTATG	3295	29.566105	40
CTCGTAT	3315	29.387728	39
GACCTAT	3310	29.16023	26
AGACCTA	3325	29.028679	25
CCTATTC	3295	29.01985	28
ACCTATT	3315	28.980509	27
AATCTCG	3355	28.970291	36
ATCTCGT	3375	28.931942	37
TCTCGTA	3380	28.889143	38
ACGAGAC	3385	28.846472	22
CGAGACC	3375	28.798616	23
CCACGAG	3385	28.780005	20
CTATTCA	3335	28.671785	29
CACGAGA	3420	28.617046	21
CCCACGA	3405	28.61096	19