H23LNBCXX_l02n01_bir_1228_pa_1.35100000041356.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23LNBCXX_l02n01_bir_1228_pa_1.35100000041356.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	346903
Sequences flagged as poor quality	0
Sequence length	51
%GC	51

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACAATGCGTTATCTCGTATGCCGTC	7100	2.046681637230004	No Hit
TCTTATACACATCTCCGAGCCCACGAGACAATGCGTTATCTCGTATGCCGT	1071	0.3087318357004696	No Hit
GTACGGGAAGCAGTGGTATCAACGCAGAGTACGGGAAGCAGTGGTATCAAC	988	0.28480583909623153	No Hit
GAGTACGGGAAGCAGTGGTATCAACGCAGAGTACGGGAAGCAGTGGTATCA	464	0.13375496896827066	No Hit
TTCCCGTACTCTGCGTTGATACCACTGCTTCCCGTACTCTGCGTTGATACC	442	0.12741313854305092	No Hit
GTTAATGATAGTGTGTCGAAACACACTGGGTTTCCCCATTCGGAAATCGCC	389	0.11213509251865796	No Hit
GTACGGAAGCAGTGGTATCAACGCAGAGTACGGAAGCAGTGGTATCAACGC	383	0.11040550240268893	No Hit
GTATCAACGCAGAGTACGGGAAGCAGTGGTATCAACGCAGAGTACGGGAAG	368	0.10608152711276639	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCTGTGC	20	7.026582E-4	44.999855	3
TGCCGTC	855	0.0	37.3683	45
TCGTATG	865	0.0	36.9363	40
GCGTTAT	860	0.0	36.889416	32
CTCGTAT	870	0.0	36.724022	39
CGAGACA	870	0.0	36.724022	23
CGTATGC	875	0.0	36.514168	41
TATCTCG	885	0.0	36.355816	36
ATGCCGT	880	0.0	36.3067	44
CGTTATC	885	0.0	36.101578	33
GTATGCC	885	0.0	35.847343	42
TATGCCG	890	0.0	35.645954	43
TGCGTTA	890	0.0	35.645954	31
TCTCGTA	900	0.0	35.499886	38
AATGCGT	905	0.0	35.055134	29
AGACAAT	930	0.0	34.838596	25
CACGAGA	920	0.0	34.72815	21
CCCACGA	930	0.0	34.596664	19
GAGACAA	930	0.0	34.35473	24
ATGCGTT	925	0.0	34.297188	30