H23LNBCXX_l02n01_bir_0120_pe_95.35100000047339.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23LNBCXX_l02n01_bir_0120_pe_95.35100000047339.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	73814
Sequences flagged as poor quality	0
Sequence length	51
%GC	51

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACCTAGGTTCATCTCGTATGCCGTC	23213	31.447963800904976	No Hit
TCTTATACACATCTCCGAGCCCACGAGACCTAGGTTCATCTCGTATGCCGT	1927	2.6106158723277426	No Hit
TTATACACATCTCCGAGCCCACGAGACCTAGGTTCATCTCGTATGCCGTCT	773	1.0472268133416425	No Hit
ATACACATCTCCGAGCCCACGAGACCTAGGTTCATCTCGTATGCCGTCTTC	503	0.681442544774704	TruSeq Adapter, Index 7 (95% over 22bp)
CTCTTATACACATCTCCGAGCCCACGAGACCTAGGTTCATCTCGTATGCCG	456	0.6177689869130518	No Hit
TATACACATCTCCGAGCCCACGAGACCTAGGTTCATCTCGTATGCCGTCTT	201	0.27230606659983203	RNA PCR Primer, Index 7 (95% over 21bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGCCGTC	2555	40.94912	45
CGTCTTC	75	39.0	45
ATGCCGT	2755	37.976406	44
CGAGCCC	2800	37.767857	15
AGCCCAC	2800	37.6875	17
CCCACGA	2800	37.6875	19
CCGAGCC	2820	37.659573	14
CTAGGTT	2805	37.540108	29
GACCTAG	2805	37.540108	26
TCCGAGC	2830	37.5265	13
TATGCCG	2790	37.5	43
GGTTCAT	2790	37.5	32
GCCCACG	2815	37.48668	18
CACGAGA	2815	37.48668	21
GAGCCCA	2815	37.48668	16
AGACCTA	2810	37.47331	25
ACGAGAC	2810	37.47331	22
CCTAGGT	2805	37.459896	28
TAGGTTC	2800	37.446426	30
ATCTCGT	2790	37.419357	37