H23LNBCXX_l02n01_bir_0120_pe_1.35100000046752.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23LNBCXX_l02n01_bir_0120_pe_1.35100000046752.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	11595
Sequences flagged as poor quality	0
Sequence length	51
%GC	53

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACAGCTCTGGATCTCGTATGCCGTC	2580	22.2509702457956	No Hit
TCTTATACACATCTCCGAGCCCACGAGACAGCTCTGGATCTCGTATGCCGT	159	1.371280724450194	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACAGCTCTGGATCTCGTATGCCG	79	0.6813281586890901	No Hit
TTATACACATCTCCGAGCCCACGAGACAGCTCTGGATCTCGTATGCCGTCT	56	0.4829667960327727	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGCCGTC	295	41.949154	45
ATGCCGT	320	38.671875	44
ATCTCCG	335	37.611942	10
GCCCACG	335	37.611942	18
TATGCCG	335	37.611942	43
CACGAGA	335	37.611942	21
CCCACGA	335	37.611942	19
ACGAGAC	335	37.611942	22
TCTCCGA	335	37.611942	11
CGAGACA	335	37.611942	23
AGACAGC	335	37.611942	25
CAGCTCT	330	37.5	28
AGCTCTG	330	37.5	29
GTATGCC	340	37.058823	42
ATCTCGT	340	37.058823	37
CCACGAG	340	37.058823	20
GAGCCCA	340	37.058823	16
TCTCGTA	340	37.058823	38
CGTATGC	340	37.058823	41
CGAGCCC	340	37.058823	15