H23LNBCXX_l02n01_bir_0120_pd_89.3510000004666f.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23LNBCXX_l02n01_bir_0120_pd_89.3510000004666f.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	25442
Sequences flagged as poor quality	0
Sequence length	51
%GC	50

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACCCTGGATAATCTCGTATGCCGTC	7033	27.643267038754814	No Hit
TCTTATACACATCTCCGAGCCCACGAGACCCTGGATAATCTCGTATGCCGT	721	2.8338967062337868	No Hit
TTATACACATCTCCGAGCCCACGAGACCCTGGATAATCTCGTATGCCGTCT	275	1.080889867148809	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACCCTGGATAATCTCGTATGCCG	208	0.8175457904252811	No Hit
ATACACATCTCCGAGCCCACGAGACCCTGGATAATCTCGTATGCCGTCTTC	68	0.2672745853313419	Illumina PCR Primer Index 7 (95% over 22bp)
TATACACATCTCCGAGCCCACGAGACCCTGGATAATCTCGTATGCCGTCTT	50	0.19652543039069256	Illumina PCR Primer Index 7 (95% over 21bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGCCGTC	810	41.666668	45
ATGCCGT	885	38.135593	44
AGCCCAC	905	37.29282	17
GCCCACG	905	37.29282	18
GAGCCCA	905	37.29282	16
CGAGCCC	905	37.29282	15
CCACGAG	910	37.08791	20
TATGCCG	910	37.08791	43
CACGAGA	910	37.08791	21
CCCACGA	910	37.08791	19
TCTCGTA	910	37.08791	38
ACGAGAC	910	37.08791	22
TCGTATG	910	37.08791	40
TCCGAGC	910	37.08791	13
CTCGTAT	910	37.08791	39
AATCTCG	905	37.0442	36
ATCTCGT	905	37.0442	37
GGATAAT	905	37.0442	32
CTGGATA	900	37.0	30
CCTGGAT	895	36.955307	29