H23LNBCXX_l02n01_bir_0120_pd_58.3510000004628d.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23LNBCXX_l02n01_bir_0120_pd_58.3510000004628d.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	344059
Sequences flagged as poor quality	0
Sequence length	51
%GC	41

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACCAAGGCGAATCTCGTATGCCGTC	15865	4.611127742625538	No Hit
TCTTATACACATCTCCGAGCCCACGAGACCAAGGCGAATCTCGTATGCCGT	2845	0.826893061945771	No Hit
GTACGGGAAGCAGTGGTATCAACGCAGAGTACGGGAAGCAGTGGTATCAAC	1402	0.4074882505616769	No Hit
TTCCCGTACTCTGCGTTGATACCACTGCTTCCCGTACTCTGCGTTGATACC	745	0.21653262957806654	No Hit
GAGTACGGGAAGCAGTGGTATCAACGCAGAGTACGGGAAGCAGTGGTATCA	716	0.20810384265489348	No Hit
CTATCATTAACTGAATCCATAGGTTAATGACTGTCTCTTATACACATCTCC	640	0.18601460795968133	No Hit
TCATTAACCTATGGATTCAGTTAATGATAGTGTGTCGAAACACCTGTCTCT	629	0.1828174818853743	No Hit
CCCGTACTCTGCGTTGATACCACTGCTTCCCGTACTCTGCGTTGATACCAC	619	0.1799110036360043	No Hit
GCGTTGATACCACTGCTTCCCGTACTCTGCGTTGATACCACTGCTTCCCGT	560	0.16276278196472116	No Hit
GTACGGAAGCAGTGGTATCAACGCAGAGTACGGAAGCAGTGGTATCAACGC	538	0.1563685298161071	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACCAAGGCGAATCTCGTATGCCG	522	0.1517181646171151	No Hit
GTATCAACGCAGAGTACGGGAAGCAGTGGTATCAACGCAGAGTACGGGAAG	419	0.12178143864860387	No Hit
TCATTAACCTATGGATTCAGTTAATGATAGCTGTCTCTTATACACATCTCC	406	0.11800301692442286	No Hit
GCTTCCCGTACTCTGCGTTGATACCACTGCTTCCCGTACTCTGCGTTGATA	381	0.1107368213009978	No Hit
CACTATCATTAACTGAATCCATAGGTTAATGACTGTCTCTTATACACATCT	371	0.10783034305162777	No Hit
TCATTAACCTATGGATTCAGTTAATGATAGTGCTGTCTCTTATACACATCT	353	0.10259868220276175	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACCCGCA	30	2.162109E-6	44.996803	26
TGCCGTC	1650	0.0	42.54243	45
GCCGTCT	70	0.0	41.782745	45
ATTGACG	40	3.450732E-7	39.372204	17
TACCCGC	35	6.238577E-6	38.56869	25
CCGGCTA	30	1.1387362E-4	37.497337	42
CGGCTAA	30	1.1387362E-4	37.497337	43
CGATGTG	30	1.1387362E-4	37.497337	42
TATCTCG	25	0.0020997934	36.01838	4
GGCGAGA	25	0.002102793	36.007908	6
TACGAGG	25	0.0021057958	35.99744	8
ATGCCGT	1990	0.0	35.273876	44
TATGCCG	2050	0.0	34.24147	43
CGAGACC	2060	0.0	34.184464	23
GGCGAAT	2035	0.0	34.051636	32
CGTATGC	2050	0.0	34.021973	41
GACCAAG	2070	0.0	34.01932	26
GCGAATC	2040	0.0	33.968174	33
CGAATCT	2050	0.0	33.912224	34
GAGACCA	2085	0.0	33.882484	24