H23LNBCXX_l02n01_bir_0120_pd_43.351000000460a9.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23LNBCXX_l02n01_bir_0120_pd_43.351000000460a9.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	129491
Sequences flagged as poor quality	0
Sequence length	51
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACCATTCCGAATCTCGTATGCCGTC	60521	46.7376111081079	RNA PCR Primer, Index 46 (95% over 21bp)
TCTTATACACATCTCCGAGCCCACGAGACCATTCCGAATCTCGTATGCCGT	10582	8.17199650940992	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACCATTCCGAATCTCGTATGCCG	5747	4.438146280436478	No Hit
TTATACACATCTCCGAGCCCACGAGACCATTCCGAATCTCGTATGCCGTCT	232	0.17916303063533373	RNA PCR Primer, Index 18 (95% over 21bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGCCGTC	6450	44.403168	45
ATGCCGT	7505	38.16128	44
GCCGTCT	80	36.55936	45
TATGCCG	8070	35.517395	43
CGTATGC	8145	35.411324	41
TCGTATG	8135	35.399544	40
ATCTCGT	8135	35.371887	37
GTATGCC	8120	35.354107	42
AATCTCG	8110	35.34222	36
TCTCGTA	8150	35.33439	38
CCCACGA	8190	35.326637	19
GCCCACG	8210	35.295387	18
CTCGTAT	8140	35.29488	39
CGAATCT	8090	35.290543	34
CCACGAG	8200	35.283558	20
GAATCTC	8105	35.280746	35
ACGAGAC	8190	35.271698	22
CCGAATC	8095	35.268745	33
CACGAGA	8210	35.267986	21
TCCGAAT	8115	35.264996	32