H23LNBCXX_l02n01_bir_0120_pd_20.35100000045dbc.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23LNBCXX_l02n01_bir_0120_pd_20.35100000045dbc.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	552794
Sequences flagged as poor quality	0
Sequence length	51
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACTAGATCCTATCTCGTATGCCGTC	8848	1.6005962438087247	No Hit
GTTAATGATAGTGTGTCGAAACACACTGGGTTTCCCCATTCGGAAATCGCC	1322	0.23914876065948618	No Hit
TCTTATACACATCTCCGAGCCCACGAGACTAGATCCTATCTCGTATGCCGT	1252	0.226485815692645	No Hit
TCATTAACCTATGGATTCAGTTAATGATAGTGTGTCGAAACACACTGGGTT	1163	0.2103857856633755	No Hit
TCATTAACCTATGGATTCAGTTAATGATAGTGTGTCGAAACACCTGTCTCT	1053	0.19048687214405366	No Hit
ATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACA	907	0.1640755869274992	No Hit
GGATACCACGTGTCCCGCCCTACTCATCGAGCTCACAGCATGTGCATTTTT	796	0.14399577419436535	No Hit
GTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGAGGATGGTC	794	0.1436339757667413	No Hit
GTACGGGGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAGTCAGA	762	0.13784520092475677	No Hit
CCCATATTCAGACAGGATACCACGTGTCCCGCCCTACTCATCGAGCTCACA	671	0.12138337246786325	No Hit
CACAGCATGTGCATTTTTGTGTACGGGGCTGTCACCCTGTATCGCGCGCCT	663	0.11993617875736712	No Hit
CATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAAT	626	0.1132429078463225	No Hit
ACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGATTCAGT	620	0.1121575125634504	No Hit
GTGGATGCCCTGGCAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGATAA	612	0.11071031885295426	No Hit
AGCGTACACGGTGGATGCCCTGGCAGTCAGAGGCGATGAAGGACGTGCTAA	604	0.10926312514245815	No Hit
CATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAAT	596	0.107815931431962	No Hit
GTACGGGAAGCAGTGGTATCAACGCAGAGTACGGGAAGCAGTGGTATCAAC	586	0.10600693929384182	No Hit
ATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATG	567	0.1025698542314135	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGCCGTC	945	0.0	42.379078	45
ATGCCGT	1060	0.0	37.78135	44
TATCTCG	1065	0.0	37.392715	36
CGTATGC	1085	0.0	37.118176	41
TATGCCG	1080	0.0	37.081696	43
CTCGTAT	1085	0.0	36.910812	39
ATCTCGT	1090	0.0	36.741493	37
ACAGCGC	25	0.0021066214	35.99841	8
TCGTATG	1120	0.0	35.958233	40
GTATGCC	1110	0.0	35.876793	42
CCTATCT	1110	0.0	35.876793	34
GACTAGA	1120	0.0	35.757347	26
AGACTAG	1125	0.0	35.598427	25
CTAGATC	1120	0.0	35.556465	28
GATCCTA	1120	0.0	35.35558	31
CCACGAG	1140	0.0	35.327385	20
TAGATCC	1130	0.0	35.042698	29
CACGAGA	1150	0.0	35.02019	21
TCCTATC	1150	0.0	35.02019	33
ACTAGAT	1140	0.0	34.932667	27