H23LNBCXX_l02n01_bir_0120_pd_16.35100000045d43.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23LNBCXX_l02n01_bir_0120_pd_16.35100000045d43.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	24021
Sequences flagged as poor quality	0
Sequence length	51
%GC	51

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACTACTTGCAATCTCGTATGCCGTC	4792	19.949211106948088	TruSeq Adapter, Index 12 (95% over 21bp)
TTATACACATCTCCGAGCCCACGAGACTACTTGCAATCTCGTATGCCGTCT	374	1.556970983722576	TruSeq Adapter, Index 12 (95% over 22bp)
TCTTATACACATCTCCGAGCCCACGAGACTACTTGCAATCTCGTATGCCGT	270	1.1240164855751216	No Hit
ATACACATCTCCGAGCCCACGAGACTACTTGCAATCTCGTATGCCGTCTTC	182	0.7576703717580451	TruSeq Adapter, Index 12 (95% over 24bp)
TATACACATCTCCGAGCCCACGAGACTACTTGCAATCTCGTATGCCGTCTT	75	0.31222680154864496	RNA PCR Primer, Index 12 (95% over 23bp)
CTCTTATACACATCTCCGAGCCCACGAGACTACTTGCAATCTCGTATGCCG	69	0.2872486574247533	No Hit
CTATACACATCTCCGAGCCCACGAGACTACTTGCAATCTCGTATGCCGTCT	27	0.11240164855751218	TruSeq Adapter, Index 12 (95% over 22bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGCCGTC	680	39.375004	45
ATGCCGT	690	38.804348	44
TATGCCG	695	38.52518	43
GTATGCC	690	38.47826	42
GCAATCT	710	38.34507	34
CGAGCCC	710	38.34507	15
CCGAGCC	710	38.34507	14
TCTCCGA	710	38.34507	11
CGAGACT	710	38.34507	23
AGACTAC	710	38.34507	25
GAGACTA	710	38.34507	24
CTCCGAG	710	38.34507	12
AATCTCG	705	38.297874	36
TGCAATC	705	38.297874	33
CGTATGC	705	38.297874	41
TCGTATG	705	38.297874	40
CTCGTAT	705	38.297874	39
GACTACT	705	38.297874	26
TTGCAAT	700	38.250004	32
ACTTGCA	700	38.250004	30