H23LNBCXX_l02n01_bir_0113_pc_89.35100000045a6f.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23LNBCXX_l02n01_bir_0113_pc_89.35100000045a6f.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	20205
Sequences flagged as poor quality	0
Sequence length	51
%GC	53

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACTCGACGGCATCTCGTATGCCGTC	7185	35.56050482553823	No Hit
TCTTATACACATCTCCGAGCCCACGAGACTCGACGGCATCTCGTATGCCGT	582	2.880475129918337	RNA PCR Primer, Index 41 (95% over 21bp)
CTCTTATACACATCTCCGAGCCCACGAGACTCGACGGCATCTCGTATGCCG	229	1.13338282603316	No Hit
TTATACACATCTCCGAGCCCACGAGACTCGACGGCATCTCGTATGCCGTCT	162	0.8017817371937639	RNA PCR Primer, Index 41 (95% over 23bp)
ATACACATCTCCGAGCCCACGAGACTCGACGGCATCTCGTATGCCGTCTTC	39	0.19302152932442465	RNA PCR Primer, Index 34 (95% over 23bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGCCGTC	790	42.721516	45
ATGCCGT	855	39.473682	44
CGAGCCC	875	39.085712	15
TCCGAGC	875	39.085712	13
CTCCGAG	875	39.085712	12
GAGCCCA	870	39.051723	16
TCTCCGA	880	38.86364	11
AGCCCAC	875	38.82857	17
GTATGCC	870	38.793102	42
CGAGACT	870	38.793102	23
CCACGAG	865	38.75723	20
CACGAGA	865	38.75723	21
CCCACGA	865	38.75723	19
ACGAGAC	865	38.75723	22
AGACTCG	865	38.75723	25
CCGAGCC	885	38.644066	14
GGCATCT	875	38.571426	34
TATGCCG	875	38.571426	43
CGTATGC	875	38.571426	41
TCGTATG	875	38.571426	40