H23LNBCXX_l02n01_bir_0113_pc_83.35100000045997.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23LNBCXX_l02n01_bir_0113_pc_83.35100000045997.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	614950
Sequences flagged as poor quality	0
Sequence length	51
%GC	49

Per base quality graph

Per base quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACTAAGCATGATCTCGTATGCCGTC	6649	1.0812261159443857	No Hit
TCTTATACACATCTCCGAGCCCACGAGACTAAGCATGATCTCGTATGCCGT	881	0.14326367997398162	No Hit
GGTATAGGTCGCGCGCTTAAGCGCCATCCATTTTCGGGGCTAGTTGATTCG	788	0.12814049922757947	No Hit
CTCGTAGACAGCGCCTCGTGGTGCGACAGGGTCCGGGCACGACGGGGCTCT	636	0.10342304252378243	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCGTATG	800	37.966145	40
ATGCCGT	800	37.966145	44
CGTATGC	805	37.730328	41
TATGCCG	805	37.730328	43
GTATGCC	820	37.040142	42
GACTAAG	825	36.815655	26
CTCGTAT	835	36.64419	39
GCCCACG	835	36.37475	18
ACTAAGC	830	36.322807	27
CGAGACT	850	35.997528	23
GAGACTA	860	35.317345	24
CCCACGA	880	35.026005	19
TGCCGTC	895	34.690353	45
AGCATGA	870	34.652794	31
TCTCGTA	890	34.37966	38
GATCTCG	885	34.065456	36
GCATGAT	885	33.811237	32
ACGAGAC	925	33.078808	22
CTAAGCA	920	32.769485	28
CACGAGA	935	32.4844	21