H23LNBCXX_l02n01_bir_0113_pc_77.351000000458e8.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23LNBCXX_l02n01_bir_0113_pc_77.351000000458e8.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	121347
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACTCTGGACCATCTCGTATGCCGTC	1408	1.1603088663090146	No Hit
GCGTTGATACCACTGCTTCCCGTACTCTGCGTTGATACCTGTCTCTTATAC	250	0.20602075040998127	No Hit
GTATCAACGCAGAGTACGGGAAGCAGTGGTATCAACGCCTGTCTCTTATAC	173	0.14256635928370706	No Hit
GATACCACCCCGTACTCTGCGTTGATACCCTGTCTCTTATACACATCTCCG	144	0.11866795223614923	No Hit
TCTTATACACATCTCCGAGCCCACGAGACTCTGGACCATCTCGTATGCCGT	131	0.10795487321483019	No Hit
GCGTTGATACCACTGCTTCCCGTACTCTGCGTTGATACTGTCTCTTATACA	126	0.10383445820663058	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACTCTGGACCATCTCGTATGCCG	123	0.1013622092017108	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTCTTAC	20	7.0086494E-4	44.999588	13
TGCCGTC	175	0.0	38.571075	45
GCCGTCT	25	0.0020997974	35.99967	45
CCCACGA	195	0.0	35.7689	19
CGTATGC	190	0.0	35.52599	41
ATGCCGT	190	0.0	35.52599	44
GACTCTG	205	0.0	35.121628	26
TATGCCG	195	0.0	34.615067	43
GTATGCC	195	0.0	34.615067	42
CCACGAG	205	0.0	34.02408	20
AGACTCT	215	0.0	33.488064	25
CTGGACC	195	0.0	33.46123	30
ACGAGAC	210	0.0	33.21398	22
TCGTATG	205	0.0	32.92653	40
TCTGGAC	200	0.0	32.6247	29
CACGAGA	215	0.0	32.441563	21
CATCTCG	210	0.0	32.142563	36
TGGACCA	200	0.0	31.49971	31
TCTCGTA	215	0.0	31.395061	38
GACCATC	195	0.0	31.15356	33