H23LNBCXX_l02n01_bir_0113_pc_75.351000000458a5.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23LNBCXX_l02n01_bir_0113_pc_75.351000000458a5.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	412087
Sequences flagged as poor quality	0
Sequence length	51
%GC	41

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACTCTGGACCATCTCGTATGCCGTC	13056	3.1682630124221345	No Hit
TCTTATACACATCTCCGAGCCCACGAGACTCTGGACCATCTCGTATGCCGT	2276	0.5523105557806968	No Hit
GTTTAAGCATATCAATAAGCGGAGGAAAAGAAACTAACAAGGATTCCCTTA	625	0.15166700235629854	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACTCTGGACCATCTCGTATGCCG	518	0.12570161155290022	No Hit
GAGTTTAAGCATATCAATAAGCGGAGGAAAAGAAACTAACAAGGATTCCCT	510	0.12376027392273961	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGCCGTC	1365	41.3734	45
ATGCCGT	1595	35.407333	44
TATGCCG	1655	34.123684	43
GTATGCC	1665	33.918736	42
CGTATGC	1680	33.61589	41
CATCTCG	1675	33.58191	36
CTGGACC	1685	33.115547	30
ACGAGAC	1715	33.061047	22
CGAGACT	1695	33.052917	23
CCCACGA	1715	32.92985	19
GCCCACG	1720	32.834126	18
TCGTATG	1725	32.738953	40
TCTGGAC	1710	32.631405	29
CTCGTAT	1735	32.550255	39
CACGAGA	1735	32.550255	21
TCTCGTA	1735	32.550255	38
GGACCAT	1715	32.536266	32
ACTCTGG	1715	32.40507	27
ATCTCGT	1745	32.36372	37
CTCTGGA	1725	32.217216	28