H23LNBCXX_l02n01_bir_0113_pc_66.3510000004578c.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23LNBCXX_l02n01_bir_0113_pc_66.3510000004578c.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	202034
Sequences flagged as poor quality	0
Sequence length	51
%GC	39

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACTCGCTATGATCTCGTATGCCGTC	3462	1.7135729629666294	No Hit
GAGTTTAAGCATATCAATAAGCGGAGGAAAAGAAACTAACAAGGATTCCCT	870	0.4306205886137977	No Hit
GTTTAAGCATATCAATAAGCGGAGGAAAAGAAACTAACAAGGATTCCCTTA	851	0.4212162309314274	No Hit
TACTAAGGGAATCCTTGTTAGTTTCTTTTCCTCCGCTTATTGATATGCTTA	746	0.3692447805814863	No Hit
TCTTATACACATCTCCGAGCCCACGAGACTCGCTATGATCTCGTATGCCGT	522	0.2583723531682786	No Hit
TTACTAAGGGAATCCTTGTTAGTTTCTTTTCCTCCGCTTATTGATATGCTT	450	0.22273478721403328	No Hit
GTACGGGAAGCAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAA	227	0.11235732599463456	No Hit
CCTTAATCCTGTCCATTACTCCTTGATTCTCTTCTTCCACTGTTTTCACAT	212	0.10493283308750012	No Hit
CCGTTACTAAGGGAATCCTTGTTAGTTTCTTTTCCTCCGCTTATTGATATG	206	0.10196303592464634	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGGGACA	25	3.8694074E-5	45.019566	4
TGCCGTC	415	0.0	42.2866	45
ATGCCGT	460	0.0	37.660767	44
CCCACGA	470	0.0	37.338165	19
CGCTATG	465	0.0	37.25581	30
TATGCCG	470	0.0	36.859474	43
GTATGCC	470	0.0	36.859474	42
GACTCGC	465	0.0	36.77197	26
ACGAGAC	480	0.0	36.560287	22
CGAGACT	470	0.0	36.38078	23
CTCGCTA	465	0.0	36.288124	28
GCCCACG	485	0.0	36.183376	18
CGTATGC	480	0.0	36.091564	41
TTAACGT	25	0.0020985247	36.01565	4
GACAGTC	25	0.002103633	35.99782	7
GCACACT	25	0.002103633	35.99782	11
ACTCGCT	475	0.0	35.524166	27
GATCTCG	490	0.0	35.355003	36
CACGAGA	500	0.0	35.097874	21
GCTATGA	495	0.0	34.997883	31