H23LNBCXX_l02n01_bir_0113_pc_55.35100000045613.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23LNBCXX_l02n01_bir_0113_pc_55.35100000045613.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	351580
Sequences flagged as poor quality	0
Sequence length	51
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACTACCGCTGATCTCGTATGCCGTC	37446	10.650776494681153	No Hit
TCTTATACACATCTCCGAGCCCACGAGACTACCGCTGATCTCGTATGCCGT	7284	2.0717902042209455	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACTACCGCTGATCTCGTATGCCG	1985	0.5645941179816827	No Hit
AAAAAGTACTCTGCGTTGATACCCCGTACTCTGCGTTGATACCTGTCTCTT	564	0.16041868138119347	No Hit
GGTATCAACGCAGAGTACTTTTTCTGTCTCTTATACACATCTCCGAGCCCA	542	0.15416121508618238	No Hit
GTATCAACGCAGAGTACGGGGTATCAACGCAGAGTACTTTTTCTGTCTCTT	484	0.13766425849024405	No Hit
AAAAAGTACTCTGCGTTGATACCCTGTCTCTTATACACATCTCCGAGCCCA	481	0.13681096763183345	No Hit
AAAAAGTACTCTGCGTTGATACCCCGTACTCTGCGTTGATACTGTCTCTTA	478	0.13595767677342283	No Hit
TATCAACGCAGAGTACGGGGTATCAACGCAGAGTACTTTTTCTGTCTCTTA	449	0.12770919847545367	No Hit
CCTTAATCCTGTCCATTACTCCTTGATTCTCTTCTTCCACTGTTTTCACAT	392	0.1114966721656522	No Hit
AAAAAGTACTCTGCGTTGATACCCCGTACTCCTGTCTCTTATACACATCTC	370	0.10523920587064112	No Hit
AAAAAGTACTCTGCGTTGATACCACCCGTACTCTGCGTTGATACCTGTCTC	367	0.1043859150122305	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGCCGTC	3950	43.63195	45
ATGCCGT	4660	36.984158	44
GCCGTCT	120	35.624214	45
TATGCCG	4870	35.48176	43
ACTACCG	4905	35.41206	27
GTATGCC	4880	35.409054	42
CGCTGAT	4875	35.399216	32
TACCGCT	4890	35.382652	29
CTACCGC	4910	35.375996	28
GCTGATC	4885	35.37281	33
GACTACC	4925	35.31394	26
CCGCTGA	4905	35.27445	31
CGAGACT	4945	35.26211	23
ACCGCTG	4915	35.248455	30
ATCTCGT	4930	35.232487	37
GATCTCG	4920	35.212635	36
AGACTAC	4960	35.200832	25
ACGAGAC	4965	35.165382	22
CCACGAG	4960	35.15547	20
CGTATGC	4935	35.1512	41