H23LNBCXX_l02n01_bir_0113_pb_95.35100000044f1d.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23LNBCXX_l02n01_bir_0113_pb_95.35100000044f1d.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	11861
Sequences flagged as poor quality	0
Sequence length	51
%GC	50

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACTCGACGGCATCTCGTATGCCGTC	3453	29.112216507882977	No Hit
TCTTATACACATCTCCGAGCCCACGAGACTCGACGGCATCTCGTATGCCGT	229	1.9306972430655087	RNA PCR Primer, Index 41 (95% over 21bp)
CTCTTATACACATCTCCGAGCCCACGAGACTCGACGGCATCTCGTATGCCG	203	1.7114914425427872	No Hit
TTATACACATCTCCGAGCCCACGAGACTCGACGGCATCTCGTATGCCGTCT	24	0.20234381586712755	RNA PCR Primer, Index 41 (95% over 23bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGCCGTC	365	41.301373	45
ATGCCGT	385	39.155846	44
CACGAGA	405	38.88889	21
CCACGAG	400	38.8125	20
CCCACGA	400	38.8125	19
AGCCCAC	395	38.734177	17
GCCCACG	395	38.734177	18
ACGAGAC	395	38.734177	22
CGAGACT	395	38.734177	23
CTCGACG	405	38.333336	28
GAGCCCA	405	38.333336	16
CGACGGC	405	38.333336	30
ACTCGAC	400	38.25	27
GACGGCA	400	38.25	31
GACTCGA	400	38.25	26
GAGACTC	400	38.25	24
GGCATCT	390	38.076923	34
CATCTCG	390	38.076923	36
CGGCATC	390	38.076923	33
GCATCTC	390	38.076923	35