H23LNBCXX_l02n01_bir_0113_pb_94.35100000044ef2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23LNBCXX_l02n01_bir_0113_pb_94.35100000044ef2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2514
Sequences flagged as poor quality	0
Sequence length	51
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACTCGACGGCATCTCGTATGCCGTC	687	27.326968973747018	No Hit
TCTTATACACATCTCCGAGCCCACGAGACTCGACGGCATCTCGTATGCCGT	35	1.3922036595067622	RNA PCR Primer, Index 41 (95% over 21bp)
CTCTTATACACATCTCCGAGCCCACGAGACTCGACGGCATCTCGTATGCCG	34	1.352426412092283	No Hit
TTATACACATCTCCGAGCCCACGAGACTCGACGGCATCTCGTATGCCGTCT	7	0.27844073190135243	RNA PCR Primer, Index 41 (95% over 23bp)
CTTATACACATCTCCGAGCCCACGAGACTCGCTATGATCTCGTATGCCGTC	4	0.15910898965791567	No Hit
CTTATACACATCTCCGAGCCCACGAGACTCGCCGGCATCTCGTATGCCGTC	4	0.15910898965791567	No Hit
CTTATACACATCTCCGAGCCACGAGACTCGACGGCATCTCGTATGCCGTCT	3	0.11933174224343676	RNA PCR Primer, Index 41 (95% over 23bp)
CTTTATACACATCTCCGAGCCCACGAGACTCGACGGCATCTCGTATGCCGT	3	0.11933174224343676	RNA PCR Primer, Index 41 (95% over 21bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CTCGACG	60	45.000004	28
ACTCGAC	60	45.000004	27
GGCATCT	70	45.000004	34
TCGACGG	60	45.000004	29
GACGGCA	65	45.000004	31
CGACGGC	65	45.000004	30
CGAGACT	70	45.000004	23
AGACTCG	70	45.000004	25
CGGCATC	70	45.000004	33
GCATCTC	70	45.000004	35
ACGGCAT	65	45.000004	32
GACTCGA	60	45.000004	26
GAGACTC	70	45.000004	24
AGCCCAC	75	45.0	17
GTATGCC	75	45.0	42
ATCTCGT	75	45.0	37
ATCTCCG	75	45.0	10
CACATCT	75	45.0	7
GCCCACG	75	45.0	18
TGCCGTC	75	45.0	45