H23LNBCXX_l02n01_bir_0113_pb_87.35100000044e1e.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23LNBCXX_l02n01_bir_0113_pb_87.35100000044e1e.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	184410
Sequences flagged as poor quality	0
Sequence length	51
%GC	41

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACTAAGCATGATCTCGTATGCCGTC	42079	22.81817688845507	No Hit
TCTTATACACATCTCCGAGCCCACGAGACTAAGCATGATCTCGTATGCCGT	11931	6.469822677728973	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACTAAGCATGATCTCGTATGCCG	1291	0.700070495092457	No Hit
TTATACACATCTCCGAGCCCACGAGACTAAGCATGATCTCGTATGCCGTCT	1031	0.5590803101784069	No Hit
ATACACATCTCCGAGCCCACGAGACTAAGCATGATCTCGTATGCCGTCTTC	375	0.20335122824141857	Illumina PCR Primer Index 1 (95% over 22bp)
TCTTTATACACATCTCCGAGCCCACGAGACTAAGCATGATCTCGTATGCCG	215	0.11658803752507998	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTGTTAG	20	6.9933076E-4	45.03202	1
TGCCGTC	4675	0.0	42.637344	45
GCCGTCT	245	0.0	35.812656	45
ATGCCGT	5925	0.0	33.680096	44
CGTATGC	6065	0.0	32.865555	41
TATGCCG	6075	0.0	32.848488	43
CTCGTAT	6080	0.0	32.78447	39
ATCTCGT	6075	0.0	32.77442	37
GTATGCC	6075	0.0	32.77442	42
GATCTCG	6055	0.0	32.77121	36
TCTCGTA	6085	0.0	32.757534	38
CCCACGA	6110	0.0	32.733963	19
GCCCACG	6105	0.0	32.723923	18
ACGAGAC	6120	0.0	32.717236	22
TCGTATG	6100	0.0	32.713863	40
GAGCCCA	6115	0.0	32.707195	16
CCACGAG	6115	0.0	32.707195	20
TCCGAGC	6110	0.0	32.69714	13
AGCCCAC	6110	0.0	32.69714	17
CGAGACT	6110	0.0	32.69714	23