H23LNBCXX_l02n01_bir_0113_pb_8.3510000004444f.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23LNBCXX_l02n01_bir_0113_pb_8.3510000004444f.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	61416
Sequences flagged as poor quality	0
Sequence length	51
%GC	52

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACCCTAGAATATCTCGTATGCCGTC	8503	13.84492640354305	No Hit
TCTTATACACATCTCCGAGCCCACGAGACCCTAGAATATCTCGTATGCCGT	660	1.0746385306760453	RNA PCR Primer, Index 44 (95% over 21bp)
TTATACACATCTCCGAGCCCACGAGACCCTAGAATATCTCGTATGCCGTCT	302	0.49172853979419046	RNA PCR Primer, Index 44 (95% over 23bp)
CTCTTATACACATCTCCGAGCCCACGAGACCCTAGAATATCTCGTATGCCG	185	0.3012244366288915	No Hit
ATACACATCTCCGAGCCCACGAGACCCTAGAATATCTCGTATGCCGTCTTC	97	0.1579392992054188	RNA PCR Primer, Index 37 (95% over 23bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGCCGTC	1075	43.11628	45
ATGCCGT	1160	39.956894	44
GTATGCC	1185	38.924053	42
GAATATC	1200	38.8125	33
TATGCCG	1195	38.786613	43
CTAGAAT	1190	38.760506	30
ACCCTAG	1190	38.760506	27
TATCTCG	1190	38.760506	36
GAGCCCA	1190	38.760506	16
AGCCCAC	1185	38.73418	17
CACGAGA	1185	38.73418	21
ACGAGAC	1185	38.73418	22
TCGTATG	1200	38.625	40
CCTAGAA	1195	38.598328	29
CCCTAGA	1195	38.598328	28
TAGAATA	1195	38.598328	31
GACCCTA	1195	38.598328	26
AGAATAT	1210	38.491734	32
CGTATGC	1205	38.46473	41
CTCGTAT	1205	38.46473	39