H23LNBCXX_l02n01_bir_0113_pb_50.3510000004498d.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23LNBCXX_l02n01_bir_0113_pb_50.3510000004498d.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	158305
Sequences flagged as poor quality	0
Sequence length	51
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACTACCGCTGATCTCGTATGCCGTC	23601	14.908562584883612	No Hit
TCTTATACACATCTCCGAGCCCACGAGACTACCGCTGATCTCGTATGCCGT	8264	5.220302580461767	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACTACCGCTGATCTCGTATGCCG	1152	0.7277091690091911	No Hit
TTATACACATCTCCGAGCCCACGAGACTACCGCTGATCTCGTATGCCGTCT	304	0.1920343640440921	No Hit
AAAAAGTACTCTGCGTTGATACCTGTCTCTTATACACATCTCCGAGCCCAC	258	0.16297653264268344	No Hit
GTATCAACGCAGAGTACTTTTTCTGTCTCTTATACACATCTCCGAGCCCAC	202	0.1276017813714033	No Hit
GGTATCAACGCAGAGTACTTTTTCTGTCTCTTATACACATCTCCGAGCCCA	188	0.11875809355358327	No Hit
AAAAAGTACTCTGCGTTGATACCCTGTCTCTTATACACATCTCCGAGCCCA	163	0.10296579387890466	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGCCGTC	2590	43.60851	45
GCCGTCT	80	42.18602	45
ATGCCGT	3375	33.465492	44
TATGCCG	3530	31.996044	43
CGTATGC	3550	31.879162	41
ATCTCGT	3530	31.86857	37
CTCGTAT	3540	31.842104	39
TCGTATG	3555	31.834324	40
GATCTCG	3515	31.81254	36
GTATGCC	3545	31.797192	42
TGATCTC	3520	31.767353	35
CGCTGAT	3535	31.759848	32
CCGCTGA	3535	31.759848	31
TCTCGTA	3545	31.733725	38
CTGATCT	3520	31.703434	34
ACGAGAC	3570	31.700567	22
GCTGATC	3525	31.658464	33
CACGAGA	3575	31.65623	21
ACCGCTG	3540	31.651432	30
TACCGCT	3540	31.651432	29