H23LNBCXX_l02n01_bir_0113_pb_49.35100000044963.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23LNBCXX_l02n01_bir_0113_pb_49.35100000044963.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	80906
Sequences flagged as poor quality	0
Sequence length	51
%GC	38

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACTACCGCTGATCTCGTATGCCGTC	3781	4.673324598917262	No Hit
TCTTATACACATCTCCGAGCCCACGAGACTACCGCTGATCTCGTATGCCGT	786	0.9714977875559292	No Hit
GTATCAACGCAGAGTACGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAA	196	0.2422564457518602	No Hit
AAAAAGTACTCTGCGTTGATACCTGTCTCTTATACACATCTCCGAGCCCAC	161	0.19899636615331373	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	143	0.1767483252169184	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACTACCGCTGATCTCGTATGCCG	131	0.1619162979259882	No Hit
GAGTACGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	125	0.15450028428052306	No Hit
TATCAACGCAGAGTACGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAA	121	0.14955627518354633	No Hit
GTACGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	118	0.1458482683608138	No Hit
GTACGGGCAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	111	0.1371962524411045	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTCTGTCTCTTATACACATCTCCGA	102	0.12607223197290682	No Hit
GTATCAACGCAGAGTACGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAA	100	0.12360022742441845	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	94	0.11618421377895334	No Hit
GTATCAACGCAGAGTACTTTTTCTGTCTCTTATACACATCTCCGAGCCCAC	91	0.1124762069562208	No Hit
AAAAAAAAAAGTACTCTGCGTTGATACCCTGTCTCTTATACACATCTCCGA	87	0.10753219785924406	No Hit
GGTATCAACGCAGAGTACGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAA	82	0.10135218648802313	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CCTGTCC	25	3.8598846E-5	44.997524	45
TGCCGTC	415	0.0	44.45539	45
ATGCCGT	500	0.0	36.897976	44
CGTATGC	525	0.0	35.140926	41
GTATGCC	525	0.0	35.140926	42
ATCTCGT	530	0.0	34.809406	37
CTCGTAT	530	0.0	34.809406	39
TATGCCG	530	0.0	34.809406	43
TCTCGTA	530	0.0	34.809406	38
TCGTATG	530	0.0	34.809406	40
ACCGCTG	540	0.0	34.16479	30
CGCTGAT	540	0.0	34.16479	32
CCGCTGA	540	0.0	34.16479	31
CTGATCT	540	0.0	34.16479	34
GCTGATC	545	0.0	33.851353	33
ACTACCG	545	0.0	33.851353	27
TACCGCT	545	0.0	33.851353	29
AGACTAC	550	0.0	33.543613	25
CTACCGC	550	0.0	33.543613	28
GATCTCG	550	0.0	33.543613	36