H23LNBCXX_l02n01_bir_0113_pb_14.3510000004450a.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23LNBCXX_l02n01_bir_0113_pb_14.3510000004450a.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	24809
Sequences flagged as poor quality	0
Sequence length	51
%GC	40

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACGTTCATTAATCTCGTATGCCGTC	4712	18.993107340078197	RNA PCR Primer, Index 45 (95% over 21bp)
TCTTATACACATCTCCGAGCCCACGAGACGTTCATTAATCTCGTATGCCGT	1258	5.070740457092184	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACGTTCATTAATCTCGTATGCCG	170	0.6852351969043493	No Hit
TTATACACATCTCCGAGCCCACGAGACGTTCATTAATCTCGTATGCCGTCT	91	0.36680237010762223	No Hit
ATACACATCTCCGAGCCCACGAGACGTTCATTAATCTCGTATGCCGTCTTC	28	0.11286226772542222	RNA PCR Primer, Index 45 (95% over 24bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGCCGTC	450	44.498005	45
ATGCCGT	580	34.524315	44
AATCTCG	610	33.195232	36
ATCTCGT	610	33.195232	37
CATTAAT	610	33.195232	32
TCTCGTA	610	33.195232	38
GACGTTC	610	33.195232	26
AGACGTT	610	33.195232	25
ATTAATC	610	33.195232	33
CTCGTAT	610	33.195232	39
GTATGCC	605	33.09769	42
GCCCACG	605	33.09769	18
TATGCCG	605	33.09769	43
CCCACGA	605	33.09769	19
ACGAGAC	605	33.09769	22
TTCATTA	615	32.925354	30
ACGTTCA	615	32.925354	27
GAGCCCA	615	32.925354	16
GTTCATT	615	32.925354	29
TAATCTC	615	32.925354	35