H23LNBCXX_l02n01_bir_0113_pb_1.3510000004435d.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23LNBCXX_l02n01_bir_0113_pb_1.3510000004435d.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	35899
Sequences flagged as poor quality	0
Sequence length	51
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACCCTAGAATATCTCGTATGCCGTC	8271	23.03963898715842	No Hit
TCTTATACACATCTCCGAGCCCACGAGACCCTAGAATATCTCGTATGCCGT	754	2.1003370567425277	RNA PCR Primer, Index 44 (95% over 21bp)
CTCTTATACACATCTCCGAGCCCACGAGACCCTAGAATATCTCGTATGCCG	246	0.6852558567091005	No Hit
TTATACACATCTCCGAGCCCACGAGACCCTAGAATATCTCGTATGCCGTCT	209	0.5821889189113902	RNA PCR Primer, Index 44 (95% over 23bp)
ATACACATCTCCGAGCCCACGAGACCCTAGAATATCTCGTATGCCGTCTTC	77	0.21449065433577535	RNA PCR Primer, Index 37 (95% over 23bp)
TATACACATCTCCGAGCCCACGAGACCCTAGAATATCTCGTATGCCGTCTT	59	0.16434998189364605	RNA PCR Primer, Index 37 (95% over 22bp)

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGGAATT	20	6.899696E-4	45.055866	4
TGCCGTC	915	0.0	43.517845	45
ATGCCGT	1005	0.0	39.620724	44
TCGTATG	1045	0.0	38.31942	40
CTCGTAT	1045	0.0	38.31942	39
TCTCGTA	1040	0.0	38.287334	38
CGTATGC	1050	0.0	38.136948	41
ATCTCGT	1045	0.0	38.10414	37
TATCTCG	1045	0.0	38.10414	36
GTATGCC	1040	0.0	38.071022	42
AGAATAT	1055	0.0	37.956203	32
TATGCCG	1050	0.0	37.922695	43
AGCCCAC	1065	0.0	37.811043	17
CCACGAG	1065	0.0	37.811043	20
CACGAGA	1065	0.0	37.811043	21
ACGAGAC	1065	0.0	37.811043	22
CTAGAAT	1065	0.0	37.811043	30
GAATATC	1060	0.0	37.77716	33
ATATCTC	1060	0.0	37.77716	35
GCCCACG	1070	0.0	37.634354	18