H23LNBCXX_l02n01_bir_0113_pa_93.351000000442e1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23LNBCXX_l02n01_bir_0113_pa_93.351000000442e1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	703531
Sequences flagged as poor quality	0
Sequence length	51
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACCCTGGATAATCTCGTATGCCGTC	6557	0.9320129461246199	No Hit
GTACGGGAAGCAGTGGTATCAACGCAGAGTACGGGAAGCAGTGGTATCAAC	1489	0.21164667939294785	No Hit
GGTATAGGTCGCGCGCTTAAGCGCCATCCATTTTCGGGGCTAGTTGATTCG	1098	0.15606988178203945	No Hit
TCTTATACACATCTCCGAGCCCACGAGACCCTGGATAATCTCGTATGCCGT	949	0.13489099982801042	No Hit
GAGTACGGGAAGCAGTGGTATCAACGCAGAGTACGGGAAGCAGTGGTATCA	811	0.11527565949474862	No Hit
GTACGGAAGCAGTGGTATCAACGCAGAGTACGGAAGCAGTGGTATCAACGC	777	0.11044289448510441	No Hit
GTCTACGAGTCGGGTTGTTTGGGAATGCAGCCCCAATCGGGCGGTAAATTC	734	0.10433086814937793	No Hit
ACCTATACCCGGCCGTCGGGGCAAGAGCCAGGCCTCGATGAGTAGGAGGGC	713	0.10134592505518591	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTATTAA	30	1.1346909E-4	37.52679	1
ATGCCGT	855	0.0	37.10274	44
GCCCACG	885	0.0	36.353462	18
TATGCCG	875	0.0	36.254684	43
CCCACGA	900	0.0	35.747574	19
CGTATGC	905	0.0	35.55007	41
TCGTATG	900	0.0	35.497593	40
CTGGATA	910	0.0	35.35474	30
GAGACCC	915	0.0	35.16155	24
CTCGTAT	915	0.0	34.915665	39
GTATGCC	915	0.0	34.669777	42
CACGAGA	945	0.0	34.521465	21
CCTGGAT	945	0.0	34.045307	29
TGCCGTC	955	0.0	33.924397	45
GATAATC	950	0.0	33.392467	33
GGATAAT	960	0.0	33.27899	32
TGGATAA	970	0.0	33.16785	31
TAATCTC	995	0.0	33.012833	35
ACGAGAC	1000	0.0	32.847767	22
AATCTCG	990	0.0	32.72505	36