H23LNBCXX_l02n01_bir_0113_pa_90.35100000044277.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23LNBCXX_l02n01_bir_0113_pa_90.35100000044277.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	20851
Sequences flagged as poor quality	0
Sequence length	51
%GC	52

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACCCTGGATAATCTCGTATGCCGTC	6741	32.32938468178984	No Hit
TCTTATACACATCTCCGAGCCCACGAGACCCTGGATAATCTCGTATGCCGT	687	3.2948060045081773	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACCCTGGATAATCTCGTATGCCG	245	1.1750035969497867	No Hit
ATACACATCTCCGAGCCCACGAGACCCTGGATAATCTCGTATGCCGTCTTC	78	0.37408277780442184	Illumina PCR Primer Index 7 (95% over 22bp)
TCTTTATACACATCTCCGAGCCCACGAGACCCTGGATAATCTCGTATGCCG	32	0.15346985756078843	No Hit
CTTAATACACATCTCCGAGCCCACGAGACCCTGGATAATCTCGTATGCCGT	23	0.1103064601218167	No Hit
TATACACATCTCCGAGCCCACGAGACCCTGGATAATCTCGTATGCCGTCTT	22	0.10551052707304207	Illumina PCR Primer Index 7 (95% over 21bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGCCGTC	705	44.361706	45
ATGCCGT	755	41.42384	44
GCCCACG	785	39.840767	18
CCACGAG	785	39.840767	20
TATGCCG	785	39.840767	43
TCTCGTA	785	39.840767	38
ACGAGAC	785	39.840767	22
CGAGACC	785	39.840767	23
AGACCCT	785	39.840767	25
CTCGTAT	785	39.840767	39
GAGACCC	785	39.840767	24
AATCTCG	780	39.807693	36
GATAATC	780	39.807693	33
ATAATCT	780	39.807693	34
GGATAAT	780	39.807693	32
TGGATAA	780	39.807693	31
AGCCCAC	790	39.588608	17
CACGAGA	790	39.588608	21
CCCACGA	790	39.588608	19
CCGAGCC	790	39.588608	14