H23LNBCXX_l02n01_bir_0113_pa_83.35100000044192.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23LNBCXX_l02n01_bir_0113_pa_83.35100000044192.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	236398
Sequences flagged as poor quality	0
Sequence length	51
%GC	42

Per base quality graph

Per base quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACAACATAATATCTCGTATGCCGTC	13147	5.561383768052183	No Hit
TCTTATACACATCTCCGAGCCCACGAGACAACATAATATCTCGTATGCCGT	5882	2.488176718923172	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACAACATAATATCTCGTATGCCG	1668	0.7055897258014027	No Hit
AAAAAGTACTCTGCGTTGATACCTGTCTCTTATACACATCTCCGAGCCCAC	448	0.18951090956776284	No Hit
GTACGGGAAGCAGTGGTATCAACGCAGAGTACGGGAAGCAGTGGTATCAAC	419	0.17724346229663535	No Hit
AAAAAGTACTCTGCGTTGATACCCTGTCTCTTATACACATCTCCGAGCCCA	390	0.16497601502550782	No Hit
AAAGTACTCTGCGTTGATACCTGTCTCTTATACACATCTCCGAGCCCACGA	306	0.1294427194815523	No Hit
AAAAAGTACTCTGCGTTGATACCACCTGTCTCTTATACACATCTCCGAGCC	300	0.12690462694269833	No Hit
AAAAAGTACTCTGCGTTGATACCCCGTACTCTGCGTTGATACTGTCTCTTA	284	0.12013638017242109	No Hit
GGTATCAACGCAGAGTACTTTTTCTGTCTCTTATACACATCTCCGAGCCCA	270	0.11421416424842849	No Hit
TTCCCGTACTCTGCGTTGATACCACTGCTTCCCGTACTCTGCGTTGATACC	268	0.11336813340214384	No Hit
GTATCAACGCAGAGTACTTTTTCTGTCTCTTATACACATCTCCGAGCCCAC	261	0.11040702544014755	No Hit
GCGTTGATACCACTGCTTCCCGTACTCTGCGTTGATACCTGTCTCTTATAC	243	0.10279274782358563	No Hit
GAGTACGGGAAGCAGTGGTATCAACGCAGAGTACGGGAAGCAGTGGTATCA	242	0.10236973240044331	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGCCGTC	1410	0.0	44.51835	45
TAGGTAA	25	0.0021044104	35.99763	34
ATGCCGT	1985	0.0	31.622604	44
AGGTACT	30	0.0051301084	30.010725	4
CGCATAA	30	0.0051301084	30.010725	4
ACCCGCT	45	3.4707613E-5	30.010723	6
CTTTATA	45	3.4707613E-5	30.010723	2
CACTGTG	30	0.005140739	29.998028	7
CCGCTGA	45	3.4808076E-5	29.998026	8
TATGCCG	2195	0.0	28.597208	43
GTATGCC	2220	0.0	28.275166	42
CGTATGC	2225	0.0	28.211626	41
CTCGTAT	2225	0.0	28.211626	39
TCGTATG	2230	0.0	28.148373	40
TATCTCG	2225	0.0	27.908276	36
TCTCGTA	2265	0.0	27.812738	38
ATCTCGT	2255	0.0	27.736534	37
ATAATAT	2235	0.0	27.682743	32
AATATCT	2240	0.0	27.620949	34
CATAATA	2250	0.0	27.49819	31