H23LNBCXX_l02n01_bir_0113_pa_58.35100000043e7e.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23LNBCXX_l02n01_bir_0113_pa_58.35100000043e7e.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	30155
Sequences flagged as poor quality	0
Sequence length	51
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACCAAGGCGAATCTCGTATGCCGTC	401	1.329796053722434	No Hit
GTACGGGAAGCAGTGGTATCAACGCAGAGTACGGGAAGCAGTGGTATCAAC	89	0.2951417675344056	No Hit
TCTTATACACATCTCCGAGCCCACGAGACCAAGGCGAATCTCGTATGCCGT	57	0.1890233792074283	No Hit
GAGTACGGGAAGCAGTGGTATCAACGCAGAGTACGGGAAGCAGTGGTATCA	48	0.15917758249046593	No Hit
GGAGGAGGAGAAATTGAAGTGCTTTTGATAAGTGCACAGAAGAAAGGGAAA	40	0.1326479854087216	No Hit
GTACGGAAGCAGTGGTATCAACGCAGAGTACGGAAGCAGTGGTATCAACGC	33	0.10943458796219532	No Hit
GTGGTATCAACGCAGAGTACGGGAAGCAGTGGTATCAACGCAGAGTACGGG	32	0.10611838832697729	No Hit
GTATCAACGCAGAGTACGGGAAGCAGTGGTATCAACGCAGAGTACGGGAAG	31	0.10280218869175924	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGCCGTC	70	45.0	45
GCCCACG	75	42.000004	18
TATGCCG	75	42.000004	43
CACGAGA	75	42.000004	21
CCCACGA	75	42.000004	19
ACGAGAC	75	42.000004	22
TCCGAGC	75	42.000004	13
GCGAATC	70	41.785713	33
GGCGAAT	70	41.785713	32
TCTCGTA	70	41.785713	38
CAAGGCG	70	41.785713	29
AGCCCAC	80	39.375	17
GTATGCC	80	39.375	42
ATGCCGT	80	39.375	44
CGTATGC	80	39.375	41
CCGAGCC	80	39.375	14
CTCCGAG	80	39.375	12
TCGTATG	75	39.000004	40
CGAGACC	75	39.000004	23
AGACCAA	75	39.000004	25